Return to main results Retrieve Phyre Job Id

Job DescriptionP55734
Confidence99.83%DateThu Jan 5 12:06:11 GMT 2012
Rank31Aligned Residues94
% Identity22%Templatec3ntaA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide PDBTitle: structure of the shewanella loihica pv-4 nadh-dependent persulfide2 reductase
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  LTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRHEQIIFHCQAGKRTSNNADKLAAIAA
Query Conservation     


 

   
  
 





   

  





  

                 


 
 

 

  

  
    
Alig confidence 













.































.





























.
Template Conservation                .     


   
           

   
   .             
  
         
   .
Template Sequence  ATPIHFDQIDNLSE. DQLLLDVRNPGELQNGGLEGAVNIPVDELRDR. XHELPKDKEIIIFCQVGLRGNVAYRQLVNN. G
Template Known Secondary structure 

B

TTTTT


T.T
S
GGGGGG


TT


TTT.GGGS
TTS
SSST.T
Template Predicted Secondary structure 







.












.








.
Template SS confidence 















































































   472.......480..... ....490.........500.........510....... ..520.........530.........540....... .
 
   83......90.........100
Predicted Secondary structure 







Query SS confidence 

















Query Sequence  PAEIFLLEDGIDGWKKAG
Query Conservation     
  
 


 

  

Alig confidence 
.















Template Conservation   .      

        
Template Sequence  Y. RARNLIGGYRTYKFAS
Template Known Secondary structure 
.
TTT
Template Predicted Secondary structure 
.




Template SS confidence 

















   549 550.........560.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions