Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	A	L	T	T	I	S	P	H	D	A	Q	E	L	I	A	R	G	A	K	L	I	D	I	R	D	A	D	E	Y	L	R	E	H	I	P	E	A	D	L	A	P	L	S	V	L	E	Q	S	G	L	P	A	K	L	R	H	E	Q	I
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?																																								?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		I	F	H	C	Q	A	G	K	R	T	S	N	N	A	D	K	L	A	A	I	A	A	P	A	E	I	F	L	L	E	D	G	I	D	G	W	K	K	A	G	L	P	V	A	V	N	K	S	Q	P	L	P	L	M	R	Q	V	Q	I	A
Secondary structure
SS confidence
Disorder																																											?	?		?	?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Sequence		A	G	G	L	I	L	I	G	V	V	L	G	Y	T	V	N	S	G	F	F	L	L	S	G	F	V	G	A	G	L	L	F	A	G	I	S	G	F	C	G	M	A	R	L	L	D	K	M	P	W	N	Q	R	A
Secondary structure
SS confidence
Disorder																																																	?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3tp9 chain B Region: 2 - 104 Aligned: 101 Modelled: 103 Confidence: 99.9% Identity: 28% PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase and rhodanese domain protein; PDBTitle: crystal structure of alicyclobacillus acidocaldarius protein with2 beta-lactamase and rhodanese domains Phyre2 PDB 1yt8 chain A domain 3 Region: 2 - 112 Aligned: 109 Modelled: 111 Confidence: 99.9% Identity: 24% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 PDB 1yt8 chain A domain 1 Region: 2 - 110 Aligned: 108 Modelled: 109 Confidence: 99.9% Identity: 23% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 PDB 1yt8 chain A Region: 2 - 112 Aligned: 109 Modelled: 111 Confidence: 99.9% Identity: 24% PDB header:transferase Chain: A: PDB Molecule:thiosulfate sulfurtransferase; PDBTitle: crystal structure of thiosulfate sulfurtransferase from pseudomonas2 aeruginosa Phyre2 PDB 3ilm chain D Region: 7 - 104 Aligned: 97 Modelled: 98 Confidence: 99.9% Identity: 23% PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr3790 protein; PDBTitle: crystal structure of the alr3790 protein from anabaena sp. northeast2 structural genomics consortium target nsr437h Phyre2 PDB 3k9r chain A Region: 7 - 104 Aligned: 97 Modelled: 98 Confidence: 99.9% Identity: 22% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:alr3790 protein; PDBTitle: x-ray structure of the rhodanese-like domain of the alr3790 protein2 from anabaena sp. northeast structural genomics consortium target3 nsr437c. Phyre2 PDB 2hhg chain A Region: 2 - 104 Aligned: 102 Modelled: 103 Confidence: 99.9% Identity: 28% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rpa3614; PDBTitle: structure of protein of unknown function rpa3614, possible tyrosine2 phosphatase, from rhodopseudomonas palustris cga009 Phyre2 PDB 3gk5 chain A Region: 3 - 106 Aligned: 100 Modelled: 104 Confidence: 99.9% Identity: 24% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized rhodanese-related protein PDBTitle: crystal structure of rhodanese-related protein (tvg0868615)2 from thermoplasma volcanium, northeast structural genomics3 consortium target tvr109a Phyre2 PDB 1tq1 chain A Region: 4 - 104 Aligned: 100 Modelled: 101 Confidence: 99.9% Identity: 24% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Single-domain sulfurtransferase Phyre2 PDB 1qxn chain A Region: 3 - 111 Aligned: 108 Modelled: 109 Confidence: 99.9% Identity: 23% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Single-domain sulfurtransferase Phyre2 PDB 1gmx chain A Region: 1 - 109 Aligned: 105 Modelled: 109 Confidence: 99.9% Identity: 19% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Single-domain sulfurtransferase Phyre2 PDB 3nhv chain E Region: 5 - 113 Aligned: 109 Modelled: 109 Confidence: 99.9% Identity: 21% PDB header:structural genomics, unknown function Chain: E: PDB Molecule:bh2092 protein; PDBTitle: crystal structure of bh2092 protein from bacillus halodurans,2 northeast structural genomics consortium target bhr228f Phyre2 PDB 3eme chain A Region: 3 - 105 Aligned: 100 Modelled: 102 Confidence: 99.9% Identity: 21% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:rhodanese-like domain protein; PDBTitle: crystal structure of rhodanese-like domain protein from2 staphylococcus aureus Phyre2 PDB 3foj chain A Region: 3 - 101 Aligned: 96 Modelled: 98 Confidence: 99.9% Identity: 23% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of ssp1007 from staphylococcus2 saprophyticus subsp. saprophyticus. northeast structural3 genomics target syr101a. Phyre2 PDB 2fsx chain A Region: 5 - 106 Aligned: 101 Modelled: 102 Confidence: 99.9% Identity: 30% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cog0607: rhodanese-related sulfurtransferase; PDBTitle: crystal structure of rv0390 from m. tuberculosis Phyre2 PDB 1e0c chain A domain 1 Region: 6 - 110 Aligned: 105 Modelled: 105 Confidence: 99.9% Identity: 21% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 PDB 1t3k chain A Region: 2 - 111 Aligned: 110 Modelled: 110 Confidence: 99.9% Identity: 19% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Cell cycle control phosphatase, catalytic domain Phyre2 PDB 3aax chain B Region: 2 - 110 Aligned: 109 Modelled: 109 Confidence: 99.9% Identity: 15% PDB header:transferase Chain: B: PDB Molecule:putative thiosulfate sulfurtransferase; PDBTitle: crystal structure of probable thiosulfate sulfurtransferase2 cysa3 (rv3117) from mycobacterium tuberculosis: monoclinic3 form Phyre2 PDB 1yt8 chain A domain 4 Region: 3 - 104 Aligned: 100 Modelled: 102 Confidence: 99.9% Identity: 17% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 PDB 1yt8 chain A domain 2 Region: 3 - 101 Aligned: 98 Modelled: 99 Confidence: 99.9% Identity: 26% Fold: Rhodanese/Cell cycle control phosphatase Superfamily: Rhodanese/Cell cycle control phosphatase Family: Multidomain sulfurtransferase (rhodanese) Phyre2 1 c3tp9B_ 2 d1yt8a3 3 d1yt8a1 4 c1yt8A_ 5 c3ilmD_ 6 c3k9rA_ 7 c2hhgA_ 8 c3gk5A_ 9 d1tq1a_ 10 d1qxna_ 11 d1gmxa_ 12 c3nhvE_ 13 c3emeA_ 14 c3fojA_ 15 c2fsxA_ 16 d1e0ca1 17 d1t3ka_ 18 c3aaxB_ 19 d1yt8a4 20 d1yt8a2 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3tp9B_ 99.9 28 PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase and rhodanese domain protein; PDBTitle: crystal structure of alicyclobacillus acidocaldarius protein with2 beta-lactamase and rhodanese domains 2 d1yt8a3 99.9 24 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 3 d1yt8a1 99.9 23 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 4 c1yt8A_ 99.9 24 PDB header:transferase Chain: A: PDB Molecule:thiosulfate sulfurtransferase; PDBTitle: crystal structure of thiosulfate sulfurtransferase from pseudomonas2 aeruginosa 5 c3ilmD_ 99.9 23 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr3790 protein; PDBTitle: crystal structure of the alr3790 protein from anabaena sp. northeast2 structural genomics consortium target nsr437h 6 c3k9rA_ 99.9 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:alr3790 protein; PDBTitle: x-ray structure of the rhodanese-like domain of the alr3790 protein2 from anabaena sp. northeast structural genomics consortium target3 nsr437c. 7 c2hhgA_ 99.9 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rpa3614; PDBTitle: structure of protein of unknown function rpa3614, possible tyrosine2 phosphatase, from rhodopseudomonas palustris cga009 8 c3gk5A_ 99.9 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized rhodanese-related protein PDBTitle: crystal structure of rhodanese-related protein (tvg0868615)2 from thermoplasma volcanium, northeast structural genomics3 consortium target tvr109a 9 d1tq1a_ 99.9 24 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Single-domain sulfurtransferase 10 d1qxna_ 99.9 23 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Single-domain sulfurtransferase 11 d1gmxa_ 99.9 19 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Single-domain sulfurtransferase 12 c3nhvE_ 99.9 21 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:bh2092 protein; PDBTitle: crystal structure of bh2092 protein from bacillus halodurans,2 northeast structural genomics consortium target bhr228f 13 c3emeA_ 99.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:rhodanese-like domain protein; PDBTitle: crystal structure of rhodanese-like domain protein from2 staphylococcus aureus 14 c3fojA_ 99.9 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of ssp1007 from staphylococcus2 saprophyticus subsp. saprophyticus. northeast structural3 genomics target syr101a. 15 c2fsxA_ 99.9 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cog0607: rhodanese-related sulfurtransferase; PDBTitle: crystal structure of rv0390 from m. tuberculosis 16 d1e0ca1 99.9 21 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 17 d1t3ka_ 99.9 19 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Cell cycle control phosphatase, catalytic domain 18 c3aaxB_ 99.9 15 PDB header:transferase Chain: B: PDB Molecule:putative thiosulfate sulfurtransferase; PDBTitle: crystal structure of probable thiosulfate sulfurtransferase2 cysa3 (rv3117) from mycobacterium tuberculosis: monoclinic3 form 19 d1yt8a4 99.9 17 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 20 d1yt8a2 99.9 26 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 21 c1e0cA_ not modelled 99.9 20 PDB header:sulfurtransferase Chain: A: PDB Molecule:sulfurtransferase; PDBTitle: sulfurtransferase from azotobacter vinelandii 22 c3i2vA_ not modelled 99.9 25 PDB header:transferase Chain: A: PDB Molecule:adenylyltransferase and sulfurtransferase mocs3; PDBTitle: crystal structure of human mocs3 rhodanese-like domain 23 c3d1pA_ not modelled 99.9 22 PDB header:transferase Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase yor285w; PDBTitle: atomic resolution structure of uncharacterized protein from2 saccharomyces cerevisiae 24 c3icrA_ not modelled 99.9 23 PDB header:oxidoreductase Chain: A: PDB Molecule:coenzyme a-disulfide reductase; PDBTitle: crystal structure of oxidized bacillus anthracis coadr-rhd 25 c2dcqA_ not modelled 99.9 20 PDB header:unknown function Chain: A: PDB Molecule:putative protein at4g01050; PDBTitle: fully automated nmr structure determination of the2 rhodanese homology domain at4g01050(175-295) from3 arabidopsis thaliana 26 c3hzuA_ not modelled 99.9 14 PDB header:transferase Chain: A: PDB Molecule:thiosulfate sulfurtransferase ssea; PDBTitle: crystal structure of probable thiosulfate sulfurtransferase ssea2 (rhodanese) from mycobacterium tuberculosis 27 c1urhA_ not modelled 99.9 22 PDB header:transferase Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase; PDBTitle: the "rhodanese" fold and catalytic mechanism of2 3-mercaptopyruvate sulfotransferases: crystal structure3 of ssea from escherichia coli 28 c1uarA_ not modelled 99.9 13 PDB header:transferase Chain: A: PDB Molecule:rhodanese; PDBTitle: crystal structure of rhodanese from thermus thermophilus hb8 29 d1urha1 not modelled 99.8 22 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 30 d1rhsa1 not modelled 99.8 21 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 31 c3ntaA_ not modelled 99.8 22 PDB header:oxidoreductase Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide PDBTitle: structure of the shewanella loihica pv-4 nadh-dependent persulfide2 reductase 32 c1boiA_ not modelled 99.8 22 PDB header:transferase Chain: A: PDB Molecule:rhodanese; PDBTitle: n-terminally truncated rhodanese 33 c2k0zA_ not modelled 99.8 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein hp1203; PDBTitle: solution nmr structure of protein hp1203 from helicobacter pylori2 26695. northeast structural genomics consortium (nesg) target3 pt1/ontario center for structural proteomics target hp1203 34 c3f4aA_ not modelled 99.8 19 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein ygr203w; PDBTitle: structure of ygr203w, a yeast protein tyrosine phosphatase2 of the rhodanese family 35 d1uara1 not modelled 99.8 15 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 36 d1okga1 not modelled 99.8 18 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 37 c3ippA_ not modelled 99.8 27 PDB header:transferase Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase ynje; PDBTitle: crystal structure of sulfur-free ynje 38 d1uara2 not modelled 99.8 22 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 39 c3g5jA_ not modelled 99.8 24 PDB header:nucleotide binding protein Chain: A: PDB Molecule:putative atp/gtp binding protein; PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630 40 c3olhA_ not modelled 99.8 20 PDB header:transferase Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase; PDBTitle: human 3-mercaptopyruvate sulfurtransferase 41 d1c25a_ not modelled 99.8 23 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Cell cycle control phosphatase, catalytic domain 42 d1ymka1 not modelled 99.8 27 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Cell cycle control phosphatase, catalytic domain 43 c2jtqA_ not modelled 99.8 18 PDB header:transferase Chain: A: PDB Molecule:phage shock protein e; PDBTitle: rhodanese from e.coli 44 d1e0ca2 not modelled 99.8 20 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 45 c1okgA_ not modelled 99.8 18 PDB header:transferase Chain: A: PDB Molecule:possible 3-mercaptopyruvate sulfurtransferase; PDBTitle: 3-mercaptopyruvate sulfurtransferase from leishmania major 46 c2j6pF_ not modelled 99.8 23 PDB header:oxidoreductase Chain: F: PDB Molecule:sb(v)-as(v) reductase; PDBTitle: structure of as-sb reductase from leishmania major 47 c1wv9B_ not modelled 99.7 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:rhodanese homolog tt1651; PDBTitle: crystal structure of rhodanese homolog tt1651 from an2 extremely thermophilic bacterium thermus thermophilus hb8 48 d1okga2 not modelled 99.7 17 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 49 c2uzqE_ not modelled 99.7 25 PDB header:hydrolase Chain: E: PDB Molecule:m-phase inducer phosphatase 2; PDBTitle: protein phosphatase, new crystal form 50 c2eg4B_ not modelled 99.7 18 PDB header:transferase Chain: B: PDB Molecule:probable thiosulfate sulfurtransferase; PDBTitle: crystal structure of probable thiosulfate sulfurtransferase 51 d1rhsa2 not modelled 99.7 21 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 52 c3op3A_ not modelled 99.7 21 PDB header:hydrolase Chain: A: PDB Molecule:m-phase inducer phosphatase 3; PDBTitle: crystal structure of cell division cycle 25c protein isoform a from2 homo sapiens 53 c2vswB_ not modelled 99.6 24 PDB header:hydrolase Chain: B: PDB Molecule:dual specificity protein phosphatase 16; PDBTitle: the structure of the rhodanese domain of the human dual2 specificity phosphatase 16 54 d1whba_ not modelled 99.6 14 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Ubiquitin carboxyl-terminal hydrolase 8, USP8 55 c3r2uC_ not modelled 99.6 14 PDB header:hydrolase Chain: C: PDB Molecule:metallo-beta-lactamase family protein; PDBTitle: 2.1 angstrom resolution crystal structure of metallo-beta-lactamase2 from staphylococcus aureus subsp. aureus col 56 d2gwfa1 not modelled 99.6 15 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Ubiquitin carboxyl-terminal hydrolase 8, USP8 57 c2oucB_ not modelled 99.6 23 PDB header:hydrolase Chain: B: PDB Molecule:dual specificity protein phosphatase 10; PDBTitle: crystal structure of the map kinase binding domain of mkp5 58 d1urha2 not modelled 99.5 22 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 59 d1hzma_ not modelled 99.4 20 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Cell cycle control phosphatase, catalytic domain 60 c2f46A_ not modelled 96.0 20 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative phosphatase (nma1982) from neisseria2 meningitidis z2491 at 1.41 a resolution 61 d1ywfa1 not modelled 95.5 20 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Mycobacterial PtpB-like 62 c3gxgA_ not modelled 94.1 15 PDB header:hydrolase Chain: A: PDB Molecule:putative phosphatase (duf442); PDBTitle: crystal structure of putative phosphatase (duf442) (yp_001181608.1)2 from shewanella putrefaciens cn-32 at 1.60 a resolution 63 c2oz5A_ not modelled 92.6 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phosphotyrosine protein phosphatase ptpb; PDBTitle: crystal structure of mycobacterium tuberculosis protein tyrosine2 phosphatase ptpb in complex with the specific inhibitor omts 64 d1xria_ not modelled 91.4 16 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 65 c3flhC_ not modelled 88.0 17 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein lp_1913; PDBTitle: crystal structure of lp_1913 protein from lactobacillus2 plantarum,northeast structural genomics consortium target3 lpr140b 66 c2i6oA_ not modelled 79.1 21 PDB header:hydrolase Chain: A: PDB Molecule:sulfolobus solfataricus protein tyrosine PDBTitle: crystal structure of the complex of the archaeal sulfolobus2 ptp-fold phosphatase with phosphopeptides n-g-(p)y-k-n 67 c2imgA_ not modelled 71.6 26 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 23; PDBTitle: crystal structure of dual specificity protein phosphatase2 23 from homo sapiens in complex with ligand malate ion 68 d1fpza_ not modelled 70.0 17 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 69 c1fpzF_ not modelled 54.3 18 PDB header:hydrolase Chain: F: PDB Molecule:cyclin-dependent kinase inhibitor 3; PDBTitle: crystal structure analysis of kinase associated phosphatase2 (kap) with a substitution of the catalytic site cysteine3 (cys140) to a serine 70 c1yz4A_ not modelled 53.3 15 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity phosphatase-like 15 isoform a; PDBTitle: crystal structure of dusp15 71 c3rgqA_ not modelled 51.9 15 PDB header:hydrolase Chain: A: PDB Molecule:protein-tyrosine phosphatase mitochondrial 1; PDBTitle: crystal structure of ptpmt1 in complex with pi(5)p 72 c2r0bA_ not modelled 49.9 14 PDB header:hydrolase Chain: A: PDB Molecule:serine/threonine/tyrosine-interacting protein; PDBTitle: crystal structure of human tyrosine phosphatase-like2 serine/threonine/tyrosine-interacting protein 73 c2wgpA_ not modelled 48.9 18 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 14; PDBTitle: crystal structure of human dual specificity phosphatase 14 74 c1wrmA_ not modelled 47.1 18 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity phosphatase 22; PDBTitle: crystal structure of jsp-1 75 d1jf8a_ not modelled 45.6 15 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:Phosphotyrosine protein phosphatases I Family:Low-molecular-weight phosphotyrosine protein phosphatases 76 d1m3ga_ not modelled 41.8 18 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 77 c2l18A_ not modelled 35.3 20 PDB header:oxidoreductase Chain: A: PDB Molecule:arsenate reductase; PDBTitle: an arsenate reductase in the phosphate binding state 78 d1jl3a_ not modelled 34.0 24 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:Phosphotyrosine protein phosphatases I Family:Low-molecular-weight phosphotyrosine protein phosphatases 79 d1vhra_ not modelled 30.8 10 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 80 d1vk9a_ not modelled 25.6 20 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Hypothetical protein TM1506 81 c3rofA_ not modelled 25.0 19 PDB header:hydrolase Chain: A: PDB Molecule:low molecular weight protein-tyrosine-phosphatase ptpa; PDBTitle: crystal structure of the s. aureus protein tyrosine phosphatase ptpa 82 c1oheA_ not modelled 24.4 15 PDB header:hydrolase Chain: A: PDB Molecule:cdc14b2 phosphatase; PDBTitle: structure of cdc14b phosphatase with a peptide ligand 83 c2fekA_ not modelled 24.0 19 PDB header:hydrolase Chain: A: PDB Molecule:low molecular weight protein-tyrosine- PDBTitle: structure of a protein tyrosine phosphatase 84 c1yn9B_ not modelled 23.5 18 PDB header:hydrolase Chain: B: PDB Molecule:polynucleotide 5'-phosphatase; PDBTitle: crystal structure of baculovirus rna 5'-phosphatase2 complexed with phosphate 85 c2obnA_ not modelled 21.8 26 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a duf1611 family protein (ava_3511) from anabaena2 variabilis atcc 29413 at 2.30 a resolution 86 d1j9ia_ not modelled 20.9 28 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:Terminase gpNU1 subunit domain 87 c2g6zB_ not modelled 19.7 12 PDB header:hydrolase Chain: B: PDB Molecule:dual specificity protein phosphatase 5; PDBTitle: crystal structure of human dusp5 88 c3hmuA_ not modelled 17.5 12 PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of a class iii aminotransferase from2 silicibacter pomeroyi 89 c3lv2A_ not modelled 16.6 13 PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis 7,8-diaminopelargonic2 acid synthase in complex with substrate analog sinefungin 90 c3rh0A_ not modelled 16.3 14 PDB header:oxidoreductase Chain: A: PDB Molecule:arsenate reductase; PDBTitle: corynebacterium glutamicum mycothiol/mycoredoxin1-dependent arsenate2 reductase cg_arsc2 91 d1iiba_ not modelled 15.4 32 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Lactose/Cellobiose specific IIB subunit 92 d1mkpa_ not modelled 15.1 14 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 93 c3emuA_ not modelled 15.0 10 PDB header:hydrolase Chain: A: PDB Molecule:leucine rich repeat and phosphatase domain PDBTitle: crystal structure of a leucine rich repeat and phosphatase2 domain containing protein from entamoeba histolytica 94 c1zzwA_ not modelled 14.8 19 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 10; PDBTitle: crystal structure of catalytic domain of human map kinase2 phosphatase 5 95 c3nmeA_ not modelled 14.4 19 PDB header:hydrolase Chain: A: PDB Molecule:sex4 glucan phosphatase; PDBTitle: structure of a plant phosphatase 96 c3bnuA_ not modelled 13.4 12 PDB header:oxidoreductase Chain: A: PDB Molecule:polyamine oxidase fms1; PDBTitle: crystal structure of polyamine oxidase fms1 from2 saccharomyces cerevisiae in complex with bis-(3s,3's)-3 methylated spermine 97 c1e1cA_ not modelled 13.2 13 PDB header:isomerase Chain: A: PDB Molecule:methylmalonyl-coa mutase alpha chain; PDBTitle: methylmalonyl-coa mutase h244a mutant 98 c3nbmA_ not modelled 13.2 13 PDB header:transferase Chain: A: PDB Molecule:pts system, lactose-specific iibc components; PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae. 99 d1p8aa_ not modelled 12.3 9 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:Phosphotyrosine protein phosphatases I Family:Low-molecular-weight phosphotyrosine protein phosphatases

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0