Job Description P55734 Confidence 87.98% Date Thu Jan 5 12:06:11 GMT 2012 Rank 65 Aligned Residues 72 % Identity 17% Template c3flhC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein lp_1913; PDBTitle: crystal structure of lp_1913 protein from lactobacillus2 plantarum,northeast structural genomics consortium target3 lpr140b Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		I	S	P	H	D	A	Q	E	L	I	A	R	G	.	.	.	A	K	L	I	D	I	R	D	A	D	E	Y	L	R	E	H	I	P	E	A	D	L	A	P	L	S	V	L	E	Q	S	G	L	P	A	K	L	R	H	E	Q	I	I	F	H	C	Q	A	G	K	R	T	S	N	N	A	D	K	L	A	A	I	A	A
Query Conservation															.	.	.
Alig confidence															.	.	.									.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		I	D	H	H	T	V	L	A	D	X	Q	N	A	T	G	K	Y	V	V	L	D	V	R	N	.	.	.	.	.	.	.	Q	I	K	G	A	I	A	X	P	A	K	D	L	A	T	R	I	G	E	L	D	P	A	K	T	Y	V	V	Y	D	W	T	G	G	T	T	L	G	K	T	A	L	L	V	L	L	S	A	G
Template Known Secondary structure													T	T												.	.	.	.	.	.	.			T	T													G	G	G	S		T	T	S							T	T			S	S												T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		83	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		98	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions