 |
Job Description | P0AEC5 | Confidence | 89.38% | Date | Thu Jan 5 11:23:00 GMT 2012 |
Rank | 217 | Aligned Residues | 127 |
% Identity | 12% | Template | d3by8a1 |
SCOP info | Profilin-like
| Sensory domain-like
| Sensory domain of two-component sensor kinase
|
Resolution | 1.45 |
|
 |
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
. | . | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | R | Q | L | E | D | A | G | A | S | I | I | E | P | L | A | V | . |
. |
S | T | E | Y | G | M | S | L | Q | N | . |
R | E | S | I | G | Q | L | I | S | V | L | H | R | R | H | S | D | I | V | R | A | I | S | V | Y | D | E | N | N | R | L | F | V | T | S | N | F | H | L | D | P | S | S | M | Q | L | G | S | N |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   | . | . |   |   |   |   |   |
|   |   |   |
| . |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
T | R | D | G | L | A | N | K | A | L | A | V | A | R | T | L | A | D | S | P | E | I | R | Q | G | L | Q | K | K | P | Q | E | S | G | I | Q | A | I | A | E | A | V | R | K | R | . |
. |
N | D | L | L | F | I | V | V | T | D | M | Q | S | L | R | Y | S | H | P | E | A | Q | R | I | G | Q | P | F | K | G | D | D | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | T | T | S |
| G | G | G |
| S |  |  |  |  |  |  |  |  |  |  |  | . | . | T | T |
| S |  |  |  |  |  |  | T | T |
| B | B | S |
|
| S | S | G | G | G | T | T | S | B |
|
|
| G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | F | P | R | Q | L | T | V | T | R | D | G | D | I | M | I | L | R | T | P | I | I | S | E | S | Y | S | P | D | E | S | P | S | S | D | A | K | N | S | Q | N | M | L | G | Y | I | A | L | E | L | D | L | K | S | V | R | L | Q | Q | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
L | K | A | L | N | G | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
N | V | A | I | N | R | G | F | L | A | Q | A | L | R | V | F | T | P | I | Y | D | E | N | H | K | Q | I | G | V | V | A | I | G | L | E | L | S | R | V | T | Q | Q | I | N |
Template Known Secondary structure |   |
T | G | G | G | G | T |
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| S | S | S | S |
|  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|