 |
Job Description | P0AEC5 | Confidence | 27.61% | Date | Thu Jan 5 11:23:00 GMT 2012 |
Rank | 409 | Aligned Residues | 44 |
% Identity | 11% | Template | c3r6uA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:choline-binding protein; |
PDBTitle: crystal structure of choline binding protein opubc from bacillus2 subtilis
|
Resolution | 1.61 Å |
|
  |   |
675 | . | . | . | . | 680 | . | . | . | . | . | . | . | . | |
. | 690 | . | . | . | . | . | . | . | . | |
|
|
. | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|  |  |  |  |  |
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | N | P | A | N | L | K | L | I | G | A | L | L | E | . |
D | M | V | Q | H | V | E | L | C | D | . |
. |
. |
S | G | H | Q | A | V | E | R | A | K | Q | M | P | F | D | L | I | L | M | D |
Query Conservation |   |
|
|   |   |
|   |   |
|   |   |   |
|
|   | . |   |   |
|   |   |
|   |   |
|   | . | . | . |   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|   |   |
|   |
Template Sequence |   |
E | S | E | I | I | A | S | M | L | G | Q | L | I | E | H | H | T | D | L | K | T | T | T | I | K | N | L | G | S | N | A | V | Q | Q | Q | A | L | M | N | G | E | I | D | I | A | A | T | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|