 |
| Job Description | P0AEC5 | | Confidence | 39.42% | Date | Thu Jan 5 11:23:00 GMT 2012 |
| Rank | 349 | Aligned Residues | 67 |
| % Identity | 15% | Template | c3dmgA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; |
PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy
|
| Resolution | 1.55 Å |
|
| | |
666 | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | |
|
. | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . |
| Predicted Secondary structure | |
|
|
|  | | | |  |
|
|
|  | | | | | | | | | | | | |
|
|
| | | | | |
|
| | | | | | | | | | |
|
|
|
| | | | | | . | . |
|
|
|
|
|
|
| | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | A | M | T | V | M | A | V | D | D | N | P | A | N | L | K | L | I | G | A | L | L | E | D | M | V | Q | H | V | E | L | C | D | S | G | H | Q | A | V | E | R | A | K | Q | M | P | F | D | L | I | L | M | D | . |
. |
I | Q | M | P | D | M | D | G | I | R | A | C | E | L | I |
| Query Conservation | |
| | | |
|
|
|
|
|
|
| | |
| | |
| | | |
|
| | | |
| | |
| | |
| | |
| |
|
|
| | | | | | | | |
|
|
|
|
|
| . | . | | |
|
| |
|
|
| |
| | | | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | |
| | |
|
| | | | |
|
| | |
| | |
| | | | | | | | | | | | | |
| | | | | . | | | | | | |
|
| |
|
| |
|
|
| | | | | | | | | | | | | | | |
| Template Sequence | |
M | G | A | E | V | V | G | V | E | D | D | L | A | S | V | L | S | L | Q | K | G | L | E | A | N | A | L | K | A | Q | A | L | H | S | D | V | D | E | A | . |
L | T | E | E | A | R | F | D | I | I | V | T | N | P | P | F | H | V | G | G | A | V | I | L | D | V | A | Q | A | F |
| Template Known Secondary structure | |
T | T |
| | | | | | | S | B | | | | | | | | | | | | | | T | T |
|
|
| | | | |
| S | T | T | T | T | . | S |
| T | T |
|
| | | | | | |
|
|
|
|
| T | T |
| S | S |
|
| | | | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | |
|
| | | | | | | | | | | | | |
|
|
|
|
| | | | |
|
|
| | |
| . |
|
|
|
|
|
| | | | | | | |
|
| | |
|
|
|
|
|
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | |
. | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
