Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC5
Confidence64.51%DateThu Jan 5 11:23:00 GMT 2012
Rank264Aligned Residues79
% Identity14%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   683......690.........700 .........710.........720.........730.........740.. .......750...
Predicted Secondary structure 




.......

















..




Query SS confidence 

















. . . . . . .









































. .










Query Sequence  IGALLEDMVQHVELCDSG. . . . . . . HQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQT. . PVIAVTAHAMA
Query Conservation     

   
  
  
  
....... 


        





  

 


 
    

        ..






    
Alig confidence 

















.......









































..










Template Conservation 
   
    
         
                 
 







         

             


 
    
Template Sequence  LEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGN
Template Known Secondary structure  TT


STT

T
S
SS

SSS


STT
TT
Template Predicted Secondary structure 





























Template SS confidence 















































































   170.........180.........190.........200.........210.........220.........230.........240.........
 
   754.....760.
Predicted Secondary structure 
Query SS confidence 







Query Sequence  GQKEKLLG
Query Conservation          
Alig confidence 







Template Conservation          
Template Sequence  AIVEQARQ
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 







   250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions