Job Description P0AEC5 Confidence 100.00% Date Thu Jan 5 11:23:00 GMT 2012 Rank 4 Aligned Residues 271 % Identity 15% Template c3d2rB_ PDB info PDB header:transferase Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp Resolution 2.03 Å

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		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.								.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.
Query Sequence		L	R	E	T	L	E	Q	M	E	I	Q	N	V	E	L	D	L	A	K	K	R	A	Q	E	A	A	R	I	K	S	E	F	L	A	N	M	S	H	E	L	R	T	P	L	N	G	V	I	G	F	T	R	L	T	.	.	.	.	.	.	.	L	K	T	E	L	T	P	T	Q	R	D	H	L	N	T	I	E	R	S
Query Conservation																																																								.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	L	V	K	S	W	Y	I	Q	S	L	M	D	L	V	E	F	H	E	K	S	P	D	D	Q	K	A	L	S	D	F	V	D	T	L	I	K	V	R	N	R	H	H	N	V	V	P	T	M	A	Q	G	I	I	E	Y	K	A	C	T	V	D	P	V	T	N	Q	N	L	Q	Y	F	L	D	R	F	Y	M	N
Template Known Secondary structure																		G	G	G	G	S		T	T																			T	T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.								.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		A	N	N	L	L	A	I	I	N	D	V	L	D	F	S	K	L	E	A	G	K	L	I	L	E	.	.	.	.	S	I	P	F	P	L	R	S	T	L	D	E	V	V	T	L	L	A	H	S	S	H	.	.	.	.	.	.	.	D	K	G	L	E	L	T	L	N	I	K	S	D	V	P	D	N	V	I	G	D	P
Query Conservation																											.	.	.	.																							.	.	.	.	.	.	.
Alig confidence																											.	.	.	.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	S	T	R	M	L	M	N	Q	H	I	L	I	F	S	D	S	Q	T	G	N	P	S	H	I	G	S	I	D	P	N	C	D	V	V	A	V	V	Q	D	A	F	E	C	S	R	M	L	C	D	Q	Y	Y	L	S	S	P	E	L	K	L	T	Q	V	N	G	K	F	P	D	Q	P	I	H	I	V	Y	V	P
Template Known Secondary structure																		S	S					T	T	S	B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.									.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		L	R	L	Q	Q	I	I	T	N	L	V	G	N	A	I	K	F	T	.	.	.	.	.	.	.	.	E	N	G	N	I	D	I	L	V	E	K	R	A	L	S	N	T	K	V	Q	I	E	V	Q	I	R	D	T	G	I	G	I	P	E	R	D	Q	S	R	L	F	Q	A	F	R	Q	A	D	A	S	I	S	R	R
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.											.	.	.	.	.																																		.	.
Template Conservation																																						.	.	.	.	.																																		.	.
Template Sequence		S	H	L	H	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	H	Q	E	N	Q	P	S	L	T	P	I	E	V	I	V	V	.	.	.	.	.	L	G	K	E	D	L	T	I	K	I	S	D	R	G	G	G	V	P	L	R	I	I	D	R	L	F	S	Y	T	Y	S	T	A	.	.	P	T	P	P
Template Known Secondary structure																							T	T	T	S	S	S										.	.	.	.	.			S	S										S					G	G	G	T	T	G	G	G	S	T	T			S	S	.	.
Template Predicted Secondary structure																																						.	.	.	.	.																																		.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	G	T	G	L	G	L	V	I	T	Q	K	L	V	N	E	M	G	G	D	I	S	F	H	S	Q	P	N	R	G	S	T	F	W	F	H	I	N	L	D	L	N	P	N	I	I	I	E	G	P	S	T	Q	C	L	A	G	K	R	L	A	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	N	L	Y	S	L	S	G	Y	G	T	D	A	I	I	Y	L	K	A	L	S	S	E	S	I	E	K	L	P	V	F	N	K	S	A	F	K	H	Y	D	W	C	I
Template Known Secondary structure			S	S	S														T	T									T	T	T										S	S	T	T	T		B							S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions