Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC5
Confidence29.56%DateThu Jan 5 11:23:00 GMT 2012
Rank390Aligned Residues95
% Identity9%Templatec3b89A_
PDB info PDB header:transferaseChain: A: PDB Molecule:16s rrna methylase; PDBTitle: crystal structure of rrna methylase from escherichia coli
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   666...670.........680.........690.........700.........710.........720.........730.........740.....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  LAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVI
Query Conservation      






  
  
   

   
  
  
  
 


        





  

 


 
    

        


Alig confidence 

































..











































Template Conservation      
 
 
 
   
  
                ..
          
 
    

  
                     
Template Sequence  GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQ. . DVLCAPPAEAGDLALIFKLLPLLEREQAGSAXALLQSLNTPRXA
Template Known Secondary structure  T
SSBTTT

..
TTTS



B
S
S
STTT
B
S
Template Predicted Secondary structure 









..


















Template SS confidence 















































































   123......130.........140.........150...... ...160.........170.........180.........190.........200
 
   746...750.........760..
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  AVTAHAMAGQKEKLLGA
Query Conservation 



            
Alig confidence 
















Template Conservation 



           
 
Template Sequence  VSFPTRSEANYAAWFEG
Template Known Secondary structure  S



S
Template Predicted Secondary structure 





Template SS confidence 
















   201........210.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions