Job Description P0AEC5 Confidence 41.24% Date Thu Jan 5 11:23:00 GMT 2012 Rank 337 Aligned Residues 103 % Identity 17% Template c2iy3A_ PDB info PDB header:rna-binding Chain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome Resolution 16.00 Å

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		666	.	.	.	670	.	.	.	.	.	.				.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700								.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.
Predicted Secondary structure													.	.	.																									.	.	.	.	.	.	.
Query SS confidence													.	.	.																									.	.	.	.	.	.	.
Query Sequence		L	A	M	T	V	M	A	V	D	D	N	.	.	.	P	A	N	L	K	L	I	G	A	L	L	E	D	M	V	Q	H	V	E	L	C	D	S	G	.	.	.	.	.	.	.	H	Q	A	V	E	R	A	K	Q	M	P	F	D	L	I	L	M	D	I	Q	M	P	D	M	D	G	I	R	A	C	E	L	I	H	Q
Query Conservation													.	.	.																									.	.	.	.	.	.	.
Alig confidence													.	.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G	R	L	Q	I	D	E	P	L	M	G	E	L	A	R
Template Known Secondary structure		T	T										S	S																T								T	T																		T		S										S	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		736	.	.	.	740	.	.	.			.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.					.	.	.	.	.	.	.
Predicted Secondary structure										.	.																			.	.	.	.
Query SS confidence										.	.																			.	.	.	.
Query Sequence		L	P	H	Q	Q	Q	T	P	.	.	V	I	A	V	T	A	H	A	M	A	G	Q	K	E	K	L	L	G	.	.	.	.	A	G	M	S	D	Y	L
Query Conservation										.	.																			.	.	.	.
Alig confidence										.	.																			.	.	.	.
Template Conservation
Template Sequence		L	K	E	V	L	G	P	D	E	V	L	L	V	L	D	A	M	T	G	Q	E	A	L	S	V	A	R	A	F	D	E	K	V	G	V	T	G	L	V
Template Known Secondary structure									S								S	S	S		S													S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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