Job Description P0AEC5 Confidence 100.00% Date Thu Jan 5 11:23:00 GMT 2012 Rank 5 Aligned Residues 260 % Identity 15% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.									.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.
Query Sequence		D	L	R	E	T	L	E	Q	M	E	I	Q	N	V	E	L	D	L	A	K	K	R	A	Q	E	A	A	R	I	K	S	E	F	L	A	N	M	S	H	E	L	R	T	P	L	N	G	V	I	G	F	T	R	L	T	.	.	.	.	.	.	.	.	L	K	T	E	L	T	P	T	Q	R	D	H	L	N	T	I	E
Query Conservation																																																									.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	Q	L	V	Q	S	W	Y	V	Q	S	L	L	D	I	M	E	F	L	D	K	D	P	E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y
Template Known Secondary structure																			T	T	S	S			T	T	S	T	T	T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.						.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.								.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																														.	.	.	.	.																								.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.																								.	.	.	.	.	.	.
Query Sequence		R	S	A	N	N	L	L	A	I	I	N	D	V	L	D	F	S	K	L	E	A	G	K	L	I	L	E	S	.	.	.	.	.	I	P	F	P	L	R	S	T	L	D	E	V	V	T	L	L	A	H	S	S	H	D	K	.	.	.	.	.	.	.	G	L	E	L	T	L	N	I	K	S	D	V	P	D	N	V	I
Query Conservation																														.	.	.	.	.																								.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V
Template Known Secondary structure																		T	S	S	S		S	S		S		S		B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430							.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		G	D	P	L	R	L	Q	Q	I	I	T	N	L	V	G	N	A	I	K	F	T	E	N	G	N	I	D	.	.	.	.	.	.	I	L	V	E	K	R	A	L	S	N	T	K	V	Q	I	E	V	Q	I	R	D	T	G	I	G	I	P	E	R	D	Q	S	R	L	F	Q	A	F	R	Q	A	D	A	S	I	S	R
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.											.	.	.																											.	.	.	.	.	.
Template Conservation																																													.	.	.																											.	.	.	.	.	.
Template Sequence		Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	.	.	.	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	.	.	.	.	.	.	S	T
Template Known Secondary structure																									T	T	T	T		S													S	S	.	.	.																			G	G	G	G		T	T	T	.	.	.	.	.	.	T
Template Predicted Secondary structure																																													.	.	.																											.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300							.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	G	G	T	G	L	G	L	V	I	T	Q	K	L	V	N	E	M	G	G	D	I	S	F	H	S	Q	P	N	R	G	S	T	F	W	F	H	I	N	L	D	L	N	P	N	I	I	I	E	G	P	S	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V	I	Y	L	K	A	L	S	T	D	S	V	E	R	L	P	V	Y	N	K
Template Known Secondary structure						S	S													T	T									T	T											S	S	T	T	T		B							S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions