Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC5
Confidence100.00%DateThu Jan 5 11:23:00 GMT 2012
Rank8Aligned Residues239
% Identity22%Templatec2ayxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor kinase protein rcsc; PDBTitle: solution structure of the e.coli rcsc c-terminus (residues2 700-949) containing linker region and phosphoreceiver3 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   532.......540.........550.........560.........570.........580.........590.........600.........610.
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  QCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLML
Query Conservation                          
   
  
                                                
Alig confidence 









































...


































Template Conservation    
 
 




 
       
   
   
  
          ...      
                            
Template Sequence  EGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQEPTP. . . EDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAP
Template Known Secondary structure 
TTTT


TTTT
SS



T...T
SS
S



SS
SS


S

TTST
Template Predicted Secondary structure 



















...
















Template SS confidence 















































































   702.......710.........720.........730.........740... ......750.........760.........770........
 
   612.......620.........630.........640.........650.........660.........670.........680.........690.
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  ALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMV
Query Conservation                       
 

     
                           






  
  
   

   
Alig confidence 


























..........










































Template Conservation                             ..........                    







      
   
   
Template Sequence  GEWVHSVAAPHELPALLARIYLIEMES. . . . . . . . . . DDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLG
Template Known Secondary structure  T
SS

ST


S
..........




S


S









SST
Template Predicted Secondary structure 














..........























Template SS confidence 















































































   779780.........790.........800..... ....810.........820.........830.........840........
 
   692.......700.........710.........720.........730.........740.........750.........760.........770.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  QHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKP
Query Conservation    
  
  
 


        





  

 


 
    

        






            


   
 

Alig confidence 











































..

































Template Conservation    
  
  
 


        



 

 

  

 

   

 ..     


 


             
 
  
 

Template Sequence  YQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQ. . LGLTLPVIGVTANALAEEKQRCLESGMDSCLSKP
Template Known Secondary structure  S

SS

SSS
SS

..

S
SSTTS


SS
Template Predicted Secondary structure 















..















Template SS confidence 















































































   849850.........860.........870.........880.........890.. .......900.........910.........920......
 
   772.......780.....
Predicted Secondary structure 


Query SS confidence 













Query Sequence  IEEERLHNLLLRYK
Query Conservation 
    
   
    
Alig confidence 













Template Conservation       
   
    
Template Sequence  VTLDVIKQTLTLYA
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 













   927..930.........940
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions