Return to main results Retrieve Phyre Job Id

Job DescriptionP30176
Confidence17.08%DateThu Jan 5 11:46:13 GMT 2012
Rank4Aligned Residues49
% Identity14%Templated2ff4a1
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150........
Predicted Secondary structure 


















Query SS confidence 
















































Query Sequence  ELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAI
Query Conservation   

  

 

   


 
  
  

 
    
 
 

  

 

  
  
Alig confidence 
















































Template Conservation   

  
    
  

   
   

           
   
 



 
  
Template Sequence  AVLAMLVINRNRPVGVDALITALWEEWPPSGARASIHSYVSNLRKLLGG
Template Known Secondary structure  TTTSTT


TTGG
Template Predicted Secondary structure 














Template SS confidence 
















































   37..40.........50.........60.........70.........80.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions