Return to main results Retrieve Phyre Job Id

Job DescriptionP30176
Confidence100.00%DateThu Jan 5 11:46:13 GMT 2012
Rank1Aligned Residues160
% Identity100%Templated2b3wa1
SCOP infoYbiA-like YbiA-like YbiA-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRD
Query Conservation   
              
 
       
 


         
  
 
 


 

 

 
      
     
  

 


 
Alig confidence 















































































Template Conservation   
              
 
       
 


         
  
 
 


 

 

 
      
     
  

 


 
Template Sequence  MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRD
Template Known Secondary structure 



S
SSSS

SS

TTSGGGTTSTTS


TTSSB






Template Predicted Secondary structure 









































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  RSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAIEK
Query Conservation          
   
  

   
  

 

  

  

 

   


 
  
  

 
    
 
 

  

 

  
  
 
Alig confidence 















































































Template Conservation          
   
  

   
  

 

  

  

 

   


 
  
  

 
    
 
 

  

 

  
  
 
Template Sequence  RSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAIEK
Template Known Secondary structure  SSS
B
TTS
TTT

SS

SSS
TTTT
S
T
Template Predicted Secondary structure 




























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions