Return to main results Retrieve Phyre Job Id

Job DescriptionP30176
Confidence8.85%DateThu Jan 5 11:46:13 GMT 2012
Rank8Aligned Residues48
% Identity13%Templated1gxqa_
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like
Resolution2.0

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150........
Predicted Secondary structure 


















Query SS confidence 
















































Query Sequence  ELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAI
Query Conservation   

  

 

   


 
  
  

 
    
 
 

  

 

  
  
Alig confidence 





























.

















Template Conservation   

  
    
  

   
   

      .    
   
 





  
Template Sequence  KLLHFFMTHPERVYSREQLLNHVWGTNVYV. EDRTVDVHIRRLRKALEP
Template Known Secondary structure  S
SS
T
SSS

.
TGG
Template Predicted Secondary structure 










.
Template SS confidence 
















































   161........170.........180.........190 .........200........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions