Return to main results Retrieve Phyre Job Id

Job DescriptionP30176
Confidence1.50%DateThu Jan 5 11:46:13 GMT 2012
Rank89Aligned Residues48
% Identity17%Templatec3q9vB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:dna-binding response regulator; PDBTitle: crystal structure of rra c-terminal domain(123-221) from deinococcus2 radiodurans
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150........
Predicted Secondary structure 


















Query SS confidence 
















































Query Sequence  ELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAI
Query Conservation   

  

 

   


 
  
  

 
    
 
 

  

 

  
  
Alig confidence 































.















Template Conservation   

  
    
  

   
   

        .  
   
 





  
Template Sequence  DILALLIRQPGRVYSRQEIGQEIWQGRLPEGS. NVVDVHMANLRAKLRD
Template Known Secondary structure  TTSTT

TT


TT
.
Template Predicted Secondary structure 













.
Template SS confidence 
















































   155....160.........170.........180...... ...190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions