Job Description P30176 Confidence 2.35% Date Thu Jan 5 11:46:13 GMT 2012 Rank 46 Aligned Residues 33 % Identity 15% Template c1q88B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:39 kda initiator binding protein; PDBTitle: crystal structure of the c-domain of the t.vaginalis inr2 binding protein, ibp39 (monoclinic form) Resolution 2.42 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																										40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	S	D	D	Y	G	D	F	S	N	F	A	A	W	P	I	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	K	T	W	P	T	S	E	H	Y	F	Q	A
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	D	S	I	S	G	W	F	D	Q	N	E	P	N	C	L	I	L	K	T	P	T	G	I	R	K	I	W	N	K	P	L	I	E	A	T	G	Q	Y	L	M	D	E	N	G	E	K	Y	D	S	W	D	K	Y	F	E	M
Template Known Secondary structure			S	S	S							S	S	S	T	T							T	T									T	T	S		T	T	S						T	T					S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions