|   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | L | A | V | V | H | K | V | I | E | E | H | I | T | V | N | P | S | S | P | A | F | R | H | G | K | S | L | G | S | G | K | N | K | D | W | S | R | V | K | F | G | A | G | R | Y | R | L | F | F | R | Y | S | E | K | E | K | V | I | I | L | G | W | M | N | D | E | N | T | L | R | T | Y | G | K | K | T | D | A |
Query Conservation |   |
|
|
|
|
|
|   |   |   |
|   |
|   |
|
|   |
|
|   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |   |   |   |   |
|   |
|
|
| . | . |   |
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |
| . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|   |   |
|
Template Sequence |   |
R | E | V | A | R | R | I | L | R | F | L | R | E | R | V | A | T | L | E | D | P | R | S | L | G | E | P | L | R | G | P | E | . |
L | G | R | F | W | K | Y | R | V | G | . |
. |
D | Y | R | L | I | C | H | I | Q | D | R | E | A | T | V | L | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | R | V | G | H | A | R | D | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S | S | S | S |  |  |  |
|
|
| S | S | . |
|
| S |
|  |  |  |  |  | T | . | . | T |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | . | 60 | . | |
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 80 | . | . | . | . | . | . | . |
  |
  |   |
127 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
Y | T |
Query Conservation |   |
|   |
Alig confidence |   |
|
|
Template Conservation |   |
|
|
Template Sequence |   |
Y | R |
Template Known Secondary structure |   |
|
|
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
88 | . |
  |