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Job DescriptionP0A799
Confidence100.00%DateThu Jan 5 11:05:09 GMT 2012
Rank9Aligned Residues381
% Identity43%Templated1qpga_
SCOP infoPhosphoglycerate kinase Phosphoglycerate kinase Phosphoglycerate kinase
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50... ......60.........70.........80
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Query Sequence  SVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAK. VMVTSHLGRPTEGEYNEEFSLLPVVNY
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Template Sequence  SKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQP. NGERNEKYSLAPVAKE
Template Known Secondary structure  SB
BGGG


TT






BSSSSBS

TT

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   4.....10.........20.........30.........40.........50.........60...... ...70.........80..
 
   81........90......... 100.........110......... 120.........130.........140
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Query Sequence  LKDKLSNPVRLVKDYLDGV. . . . . . DVAEGELVVLENVRFNKGEK. . . . . . . . . . . . . . KDDETLSKKYAALCDVFVMDA
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Template Sequence  LQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDA
Template Known Secondary structure  TS

S
SSST

TT

GGGSTTT

T
S

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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   141........150.........160.........170.........180.........190.........200.........210.........220
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Query Sequence  FGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANT
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Template Sequence  FGTAHRAHSSMVGFD. LPQ. RAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFT
Template Known Secondary structure  GGGTTS




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SGGGTTT
S
GGG
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   163......170....... ..180 .........190.........200.........210.........220.........230.........240
 
   221... .....230.........240......... 250.........260.........270.. .......280.........290...
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Query Sequence  FIAA. QGHDVGKSLYEADLVDEAKRLLTTC. . . . . NIPVPSDVRVATEFSETAPATLK. SVNDVKADEQILDIGDASAQE
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Template Sequence  FKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKL
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S



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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   294.....300.........310.........320.........330.... .....340.........350.........360.........370
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Query Sequence  LAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA. . . FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFV
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Template Sequence  FAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELL
Template Known Secondary structure  TT
SS
SS
TTSGGG
T


TT
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T
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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   371........380.....
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Query Sequence  EGKVLPAVAMLEERA
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Template Sequence  EGKELPGVAFLSEKK
Template Known Secondary structure  TS


TS
B

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   401........410.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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