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Job DescriptionP0A799
Confidence100.00%DateThu Jan 5 11:05:09 GMT 2012
Rank11Aligned Residues379
% Identity39%Templated1ltka_
SCOP infoPhosphoglycerate kinase Phosphoglycerate kinase Phosphoglycerate kinase
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2....... 10.........20.........30.........40.........50.. .......60.........70.........
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Query Sequence  SVIKMTDL. DLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGA. KVMVTSHLGRPTEGEYNEEFSLLPVVN
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Template Sequence  NKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISHCGRP. DGLRNEKYTLKPVAE
Template Known Secondary structure  S

BSSS



TT





TTS
TTTT

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S

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S
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   4.....10.........20.........30.........40.........50.........60....... ..70.........80..
 
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Query Sequence  YLKDKLSNPVRLVKDYLDGV. . . . . . DVAEGELVVLENVRFNKGEK. . . . . . . . . . . . . . . KDDETLSKKYAALCDVFVM
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Template Sequence  TLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFIN
Template Known Secondary structure  TS


S
SSSSS
TT


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TT



TS
S
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   139140.........150.........160.........170.........180.........190.........200.........210........
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Query Sequence  DAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
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Template Sequence  DAFGTAHRAHSSXVGVK. LNV. KASGFLXKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRXIIGGGXA
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TTS
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SGGGTT
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   163......170......... 180.. .......190.........200.........210.........220.........230.........240
 
   219220.... .....230.........240......... 250.........260.........270.. .......280.........290.
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Query Sequence  NTFIAA. QGHDVGKSLYEADLVDEAKRLLTTC. . . . . NIPVPSDVRVATEFSETAPATLK. SVNDVKADEQILDIGDASA
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Template Sequence  YTFKKVLNNXKIGTSLFDEAGSKIVGEIXEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWXGLDAGPKSI
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TTS


TTGGGTTT


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TT

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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   292.......300.........310.........320.........330. ........340.........350.........360........
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Query Sequence  QELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIAD. . . SEAFSIAGGGDTLAAIDLFGIADKISYISTGGGAFLE
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Template Sequence  ENYKDVILTSKTVIWNGPQGVFEXPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLE
Template Known Secondary structure  T
SS
SS
TTSGGG
TT


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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   369370.........380...
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Query Sequence  FVEGKVLPAVAMLEE
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Template Sequence  LLEGKELPGVLALSN
Template Known Secondary structure  TT


TS

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   401........410.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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