Return to main results Retrieve Phyre Job Id

Job DescriptionP0A799
Confidence100.00%DateThu Jan 5 11:05:09 GMT 2012
Rank10Aligned Residues380
% Identity39%Templated1hdia_
SCOP infoPhosphoglycerate kinase Phosphoglycerate kinase Phosphoglycerate kinase
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50... ......60.........70.........80
Predicted Secondary structure 
























.














Query SS confidence 



















































.


























Query Sequence  SVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAK. VMVTSHLGRPTEGEYNEEFSLLPVVNY
Query Conservation     

 
 

 

 





 



  
 
 

 

 
 



  
   


.


 

 


         

  

  
Alig confidence 



















































.


























Template Conservation     

 
 

 

 





 



  
 
 

 

 
 



  
   


 


 

 


         

  

  
Template Sequence  NKLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPVAAE
Template Known Secondary structure 
B
BGGGS

TT






BSSSSBS

TT
S


S


SS

TTTS
S
Template Predicted Secondary structure 





































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   81........90......... 100.........110......... 120.........130.........
Predicted Secondary structure 








......














...............







Query SS confidence 


















. . . . . .



















. . . . . . . . . . . . . . .



















Query Sequence  LKDKLSNPVRLVKDYLDGV. . . . . . DVAEGELVVLENVRFNKGEK. . . . . . . . . . . . . . . KDDETLSKKYAALCDVFVMD
Query Conservation 
   
   
  
 
     ...... 
  
 





 

  


............... 
   

  

 
 





Alig confidence 


















......



















...............



















Template Conservation 
   
   
 

 
  
      
  
  
 





 

  

              
      
   

 
 





Template Sequence  LKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVND
Template Known Secondary structure  TS


S
SSSS

TT


GGGST
TTS


T
S
Template Predicted Secondary structure 











































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   140.........150.........160.........170.........180.........190.........200.........210.........
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  AFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIAN
Query Conservation 

  


 


 


   

 
 

 





  
      
 

 












 

  
  
 
 




 

 
Alig confidence 















..





























































Template Conservation 

  


 


 

  ..    
 
 





  
        

 












 

  

 


 




 

 
Template Sequence  AFGTAHRAHSSMVGVN. . LPKKAGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAF
Template Known Secondary structure 
GGGTT





..
S

TS

SS

S
SGGGTT
S
GGG
Template Predicted Secondary structure 










..










Template SS confidence 















































































   164.....170......... 180.........190.........200.........210.........220.........230.........240.
 
   220.... .....230.........240......... 250.........260.........270...... ...280.........290..
Predicted Secondary structure  .











.....













.





Query SS confidence 




.
























. . . . .


























.















Query Sequence  TFIAA. QGHDVGKSLYEADLVDEAKRLLTTC. . . . . NIPVPSDVRVATEFSETAPATLKSVND. VKADEQILDIGDASAQ
Query Conservation   

 
. 
  

 

 
 
    
  

   .....

 

 
  
                 .
      




 

 
Alig confidence 




.
























.....


























.















Template Conservation   

 
  
  

 

 
      
  
   
   
  
 



 
                   

     




 

 
Template Sequence  TFLKVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVASGIPAGWMGLDCGPKSSA
Template Known Secondary structure 


BTT



TTGGGTT



SSSSTT

TTT
B
TT

Template Predicted Secondary structure 



































Template SS confidence 















































































   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   293......300.........310.........320.........330 .........340.........350.........360.........
Predicted Secondary structure 












...











Query SS confidence 





































. . .






































Query Sequence  ELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIA. . . DSEAFSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEF
Query Conservation       
  



 



 



   

 

  
  


...   
 







 

    
     








 

 
Alig confidence 





































...






































Template Conservation       
  



 



 



   
  

  
  


      
 







 

    
     








 

 
Template Sequence  KYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLEL
Template Known Secondary structure 
SS
SS
TTSGGG
TT

TTTT
TTTSS
S
Template Predicted Secondary structure 



























Template SS confidence 















































































   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   370.........380...
Predicted Secondary structure 




Query SS confidence 













Query Sequence  VEGKVLPAVAMLEE
Query Conservation 



 



 

  
Alig confidence 













Template Conservation 



 



 

  
Template Sequence  LEGKVLPGVDALSN
Template Known Secondary structure  TT


TS
B
Template Predicted Secondary structure 






Template SS confidence 













   402.......410.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions