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Job DescriptionP0A799
Confidence81.96%DateThu Jan 5 11:05:09 GMT 2012
Rank13Aligned Residues101
% Identity21%Templatec3zvmA_
PDB info PDB header:hydrolase/transferase/dnaChain: A: PDB Molecule:bifunctional polynucleotide phosphatase/kinase; PDBTitle: the structural basis for substrate recognition by mammalian2 polynucleotide kinase 3' phosphatase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
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Query Sequence  SLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVAEGELVVLENVRFNKGEK
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Template Sequence  IPKKLQELAAEGYKLVIFTNQMGIGRG. KLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLN. . . . . . . . . . . . . . . . . . R
Template Known Secondary structure  TT

TT.SS
TS


SSSTT..................S
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   198.200.........210.........220.... .....230.........240.........250....... .
 
   120.........130.... ..... 140.........150.........
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Query Sequence  KDDETLSKKYAALCD. . . . . . . . . . VFVMD. . . . . . . . . . . . . . . AFGTAHRAQASTHGIGKFAD
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Template Sequence  KPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP
Template Known Secondary structure  TTS
SSTT



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B
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BTTB
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   259260.........270.........280.........290.........300.........310.........320...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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