Phyre 2 alignment of P0A799 with c2qyhD

Job Description P0A799
Confidence 43.32% Date Thu Jan 5 11:05:09 GMT 2012

Rank 26 Aligned Residues 56

% Identity 16% Template c2qyhD_

PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical conserved protein, gk1056; PDBTitle: crystal structure of the hypothetical protein (gk1056) from2 geobacillus kaustophilus hta426

Resolution 2.60 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence	A	G	K	R	V	F	I	R	A	D	L	N	V	P	V	K	D	G	K	V	T	S	D	A	R	I	.	R	A	S	L	P	T	I	E	L	A	L	K	Q	G	A	K	V	M	V	T	S	H	L	G	R	P	T	E	G	E	Y	N	E	E	F	S	L	L	P	V	V	N	Y	L
Query Conservation																											.
Alig confidence								.			.	.	.	.													.																						.	.				.	.	.	.			.	.	.
Template Conservation								.			.	.	.	.																																			.	.				.	.	.	.			.	.	.
Template Sequence	X	G	R	K	I	V	F	.	F	D	.	.	.	.	I	D	G	T	L	L	D	E	Q	K	Q	L	P	L	S	T	I	E	A	V	R	R	L	K	Q	S	G	V	Y	V	A	I	A	T	.	.	G	R	A	.	.	.	.	P	F	.	.	.	X	F	E	H	V	R	K	Q	L
Template Known Secondary structure								.			.	.	.	.	S	B	T	T	T	B		T	T	S																T	T								.	.	S	S		.	.	.	.	G	G	.	.	.	G	S
Template Predicted Secondary structure								.			.	.	.	.																																			.	.				.	.	.	.			.	.	.
Template SS confidence
	1	.	.	.	.	.	.		.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.					.	.				.	50	.	.	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions