Job Description P0A799 Confidence 73.58% Date Thu Jan 5 11:05:09 GMT 2012 Rank 16 Aligned Residues 105 % Identity 18% Template c1yj5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme Resolution 2.80 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	P	T	I	E	L	A	L	K	Q	G	A	K	V	M	V	T	S	H	L	G	R	P	T	E	G	E	Y	N	E	E	F	S	L	L	P	V	V	N	Y	L	K	D	K	L	S	N	P	V	R	L	V	K	D	Y	L	D	G	V	D	V	A	E	G	E	L	V	V	L	E	N	V	R	F	N	K	G	E	K
Query Conservation
Alig confidence																																	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	K	K	L	Q	E	L	A	A	E	G	Y	K	L	V	I	F	T	N	Q	X	G	I	G	R	G	K	L	P	A	.	E	V	F	K	G	K	V	E	A	V	L	E	K	L	G	V	P	F	Q	V	L	V	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	G	L	N	R	K	P	V	S
Template Known Secondary structure												T	T														T	T	S	S			.															T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S	S	S	T	T	S	T
Template Predicted Secondary structure																																	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.															.	.	.	.	.	.	.	260	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.																140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	D	E	T	L	S	K	K	Y	A	A	L	C	D	.	.	.	.	.	.	V	F	V	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	G	T	A	H	R	A	Q	A	S	T	H	G	I	G	K	F	A	D
Query Conservation																	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	X	W	D	H	L	Q	E	Q	A	N	E	G	I	P	I	S	V	E	D	S	V	F	V	G	D	A	A	G	R	L	A	N	W	A	P	G	R	K	K	K	D	F	S	C	A	D	R	L	F	A	L	N	V	G	L	P	F	A	T	P
Template Known Secondary structure										T	T	S	S	S					S	T	T						S		S		B		T	T	S	S	T	T			S			S												T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions