Job Description P67153 Confidence 6.65% Date Thu Jan 5 12:10:31 GMT 2012 Rank 12 Aligned Residues 48 % Identity 8% Template c2xseA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thymine dioxygenase jbp1; PDBTitle: the structural basis for recognition of j-base containing2 dna by a novel dna-binding domain in jbp1 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		M	V	Q	K	P	L	I	K	Q	G	Y	.	.	.	S	L	A	E	E	I	A	N	S	V	S	H	G	I	G	L	V	F	G	I	V	G	L	V	L	L	L	V	Q	A	V	D	L	N	A	S	A
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		V	E	K	K	K	Y	L	D	S	E	F	L	L	H	C	I	S	A	Q	L	L	D	X	W	K	Q	A	R	A	R	W	L	E	L	V	G	K	E	W	A	H	X	L	A	L	N	P	E	R	K	D
Template Known Secondary structure				G	G	G	G	G	S					T	T	T	S																															T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions