Job Description P76318 Confidence 100.00% Date Thu Jan 5 12:21:45 GMT 2012 Rank 5 Aligned Residues 197 % Identity 15% Template c2aegA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein agr_pat_140; PDBTitle: x-ray crystal structure of protein atu5096 from agrobacterium2 tumefaciens. northeast structural genomics consortium target atr63. Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.
Predicted Secondary structure																																																	.																									.	.	.	.	.	.	.
Query SS confidence																																																	.																									.	.	.	.	.	.	.
Query Sequence		C	G	R	F	A	Q	S	Q	T	R	E	D	Y	L	A	L	L	A	E	D	I	E	R	D	I	P	Y	D	P	E	P	I	G	R	Y	N	V	A	P	G	T	K	V	L	L	L	S	.	E	R	D	E	H	L	H	L	D	P	V	F	W	G	Y	A	P	G	W	W	D	K	P	P	.	.	.	.	.	.	.	L
Query Conservation																																																	.																									.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																		.																									.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		C	N	L	Y	R	X	E	D	K	D	W	V	S	K	W	A	Q	D	A	E	S	L	I	N	.	.	.	.	.	.	L	X	P	A	Y	Q	X	N	P	D	Q	X	G	P	I	V	R	N	T	A	D	G	K	K	Q	L	V	H	A	R	W	G	L	P	S	P	I	F	V	Q	K	K	A	A	E	A	R	A	D	K
Template Known Secondary structure										S	S						S	S	S	S				S		.	.	.	.	.	.			S						T	T	S									T	T	S											B
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.																					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.																.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.																.
Query Sequence		I	N	A	R	V	E	T	A	A	T	S	R	M	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	W	Q	H	G	R	A	I	C	F	A	D	G	W	F	E	W	.	.	.	.	K	K	E	G	D	K	K	Q	P	F	F	I	Y	R	A	.	D	G	Q	P	I	F	M
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.																.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.																.
Template Conservation
Template Sequence		L	K	A	K	G	K	A	F	D	I	N	E	L	I	R	X	E	P	D	R	G	V	T	N	V	R	K	L	N	L	P	H	W	T	R	W	F	G	V	E	H	R	C	L	V	P	V	T	S	F	A	E	P	D	P	A	S	K	Q	E	G	G	N	V	P	N	A	W	F	A	R	D	E	A	K	S	L	X	F	F
Template Known Secondary structure				T	T	T																	B						T	T		G	G	G	G	G	G		S	G	G	G							S							T	T	S			T	T	S									S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		129	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																													.					.
Query SS confidence									.	.	.	.	.	.	.																													.					.
Query Sequence		A	A	I	G	S	T	P	.	.	.	.	.	.	.	F	E	R	G	D	E	A	E	G	F	L	I	V	T	A	A	A	D	Q	G	L	V	D	I	H	D	R	R	.	P	L	V	L	.	S	P	E	A	A	R	E	W	M	R	Q	E	I	S	G	K	E	A	S	E	I	A	A	S	G	C	V	P	A	N	Q	F
Query Conservation									.	.	.	.	.	.	.																													.					.
Alig confidence									.	.	.	.	.	.	.																													.					.												.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		A	G	I	H	V	P	Q	W	K	S	V	R	K	V	R	D	G	L	T	T	D	D	L	Y	G	F	L	T	T	D	P	N	D	L	V	K	P	I	H	E	K	A	X	P	V	L	L	L	T	R	E	E	T	E	I	W	X	R	A	.	.	.	.	P	W	D	E	A	K	H	L	A	R	P	L	P	N	D	A	L
Template Known Secondary structure													S	S	G	G	G		S															T	T	T	T	T	T		S	S								S										S	.	.	.	.						G	G	G		S				T	T	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		200	.	.				.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		S	W	H	.	.	.	P	V	S	R	A	V
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		I	I	L	S	R	E	P	Y	G	S	S	I
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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