Job Description P07822 Confidence 100.00% Date Thu Jan 5 11:00:35 GMT 2012 Rank 9 Aligned Residues 258 % Identity 14% Template c3pshA_ PDB info PDB header:metal transport Chain: A: PDB Molecule:protein hi_1472; PDBTitle: classification of a haemophilus influenzae abc transporter hi1470/712 through its cognate molybdate periplasmic binding protein mola (mola3 bound to molybdate) Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																									.	.												.	.	.
Query SS confidence																									.	.												.	.	.
Query Sequence		A	I	D	P	N	R	I	V	A	L	E	W	L	P	V	E	L	L	L	A	L	G	I	.	.	V	P	Y	G	V	A	D	T	I	N	Y	.	.	.	R	L	W	V	S	E	P	P	L	P	D	S	V	I	D	V	G	L	R	T	E	P	N	L	E	L	L	T	E	M	K	P	S	F	M	V	W	S	A	G	Y
Query Conservation																									.	.												.	.	.
Alig confidence																									.	.												.	.	.
Template Conservation
Template Sequence		P	D	H	I	N	R	A	V	V	L	Q	H	Q	T	L	N	I	A	V	Q	L	D	A	T	K	Q	I	V	G	V	L	S	N	W	K	K	Q	L	G	K	N	Y	V	R	L	A	P	E	L	E	N	M	A	M	P	G	D	L	N	S	V	N	I	E	S	L	L	A	L	K	P	D	V	V	F	V	T	N	Y	A
Template Known Secondary structure			S	S		S																T	T		G	G	G						T	T							T	T	G	G	G	T		G	G	G	G	G		B			B		S	S		B								T			S						T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	S	P	E	M	L	A	R	I	A	P	G	R	G	F	N	F	S	D	G	K	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	M	A	R	K	S	L	T	E	M	A	D	L	L	N	L	Q	S	A	A	E	T	H	L	A	Q	Y	E	D	F	I	R	S	M	K	P	R
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	E	M	I	K	Q	I	S	D	V	N	I	P	V	V	A	I	S	L	R	T	G	E	V	G	E	K	G	K	L	N	P	T	L	T	D	E	D	K	A	Y	N	D	G	L	K	Q	G	I	E	L	I	A	E	V	F	E	K	K	Q	Q	G	D	E	L	V	K	A	A	F	A	N	R	K	L	L	A	D	R
Template Known Secondary structure											T	T	T								S			S		G	G	G	T	T		S	S				T	T																					T														T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	K	R	G	A	R	P	L	L	L	T	T	L	I	D	P	R	H	M	L	V	F	G	P	N	S	L	F	Q	E	I	L	D	E	Y	G	I	P	N	A	W	Q	G	E	T	N	F	W	G	S	T	A	V	S	I	D	R	L	A	A	Y	K	D	V	D	V	L	C	F	D	H	D	N	S	K	D	M	D	A
Query Conservation
Alig confidence																				.																													.	.																															.
Template Conservation																				.																													.	.																															.
Template Sequence		L	G	D	V	S	A	D	K	R	V	R	T	Y	M	A	N	P	D	.	L	G	T	Y	G	S	G	K	Y	T	G	L	M	M	E	H	A	G	A	Y	N	V	A	A	A	T	I	K	.	.	G	F	K	Q	V	S	L	E	N	V	L	E	W	N	P	A	V	I	L	V	Q	D	R	Y	P	D	V	V	P	Q	.
Template Known Secondary structure			T	T			T	T	T	S							B	T	T	.	T					B	S	S									T	T				T	T	T	T	T		B	.	.	S															S						T	T		T	T					.
Template Predicted Secondary structure																				.																													.	.																															.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		L	M	A	T	P	L	W	Q	A	M	P	F	V	R	A	G	R	F	Q	R	V	P	A	V	.	.	.	W	F	Y	G	A	T	L	S	A	M	H	F	V	R	V	L	D	N	A	I	G
Query Conservation																										.	.	.
Alig confidence																										.	.	.
Template Conservation
Template Sequence		I	L	N	D	Q	G	W	A	N	I	Q	A	L	K	D	K	K	V	F	L	M	P	E	Y	A	K	A	W	G	Y	P	M	P	E	A	L	A	L	G	E	V	W	L	A	K	A	L	Y
Template Known Secondary structure				T		G	G	G	T	T	S					T	T							T	T					S	S								T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions