Job Description P07822 Confidence 96.22% Date Thu Jan 5 11:00:35 GMT 2012 Rank 20 Aligned Residues 187 % Identity 16% Template c3pdiG_ PDB info PDB header:protein binding Chain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife; PDBTitle: precursor bound nifen Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		N	L	E	L	L	T	E	M	K	P	S	F	M	V	W	S	A	G	Y	G	P	S	P	E	M	L	A	R	I	A	P	G	R	G	F	N	F	S	D	G	K	Q	P	L	A	M	A	R	K	S	L	T	E	M	A	D	L	L	N	L	.	.	.	Q	S	A	A	E	T	H	L	A	Q	Y	E	D	F	I	R	S
Query Conservation																																																														.	.	.
Alig confidence																																								.	.																					.	.	.
Template Conservation																																								.	.
Template Sequence		E	V	Q	T	M	H	R	A	E	V	N	M	M	V	C	S	K	A	M	L	N	V	A	R	K	L	Q	E	T	Y	G	T	P	W	F	E	G	S	.	.	F	Y	G	I	T	D	T	S	Q	A	L	R	D	F	A	R	L	L	D	D	P	D	L	T	A	R	T	E	A	L	I	A	R	E	E	A	K	V	R	A
Template Known Secondary structure				T	T	G	G	G		S						S			T	T																				.	.	S	S	S															T	T
Template Predicted Secondary structure																																								.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	P	R	F	V	K	R	G	A	R	P	L	L	L	T	T	L	I	D	P	R	H	M	L	V	F	G	P	N	S	L	F	Q	E	I	L	D	E	Y	G	I	P	N	A	W	Q	G	E	T	N	F	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	A	V	S	I	D	R	L	A
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		A	L	E	P	W	R	A	R	L	E	G	K	R	V	L	L	Y	T	G	G	V	.	.	.	.	.	.	.	K	S	W	S	V	V	S	A	L	Q	D	L	G	M	K	V	V	A	T	G	T	K	K	S	T	E	E	D	K	A	R	I	R	E	L	M	G	D	D	V	K	M	L	D	E	G	N	A	R	V	L	L
Template Known Secondary structure											T	T								S	S	S	.	.	.	.	.	.	.													T								B	S	S	S												S		S	S			B			S		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.								.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		229	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		A	Y	.	.	.	.	K	D	V	D	V	L	C	F	D	H	D	N	S	K	D	M	D	A	L	M	A	T	P	L	W	Q	A	M	P	F	V	R	A	G	R	F	Q	R	V	P	A	V	W	F	Y	G	A	T	L	S	A	M	H	F	V	R	V	L	D	N	A	I	G	G	K
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.																		.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		K	T	V	D	E	Y	Q	A	D	I	L	I	A	G	G	R	N	M	Y	T	A	L	K	.	.	.	.	.	.	.	.	G	R	V	P	F	L	D	I	N	Q	E	R	E	F	G	.	.	.	.	Y	A	G	Y	D	G	M	L	E	L	V	R	Q	L	C	I	T	L	E	C	P
Template Known Secondary structure							T	T		S						G	G	G							.	.	.	.	.	.	.	.	T	T			B					S	S	S	S			.	.	.	.																			T		T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.									410	.	.	.	.	.	.	.	.	.	420	.	.	.	.					.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions