Job Description P07822 Confidence 88.97% Date Thu Jan 5 11:00:35 GMT 2012 Rank 26 Aligned Residues 262 % Identity 11% Template c3pdiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.
Query Sequence		R	R	R	L	L	T	A	M	A	L	S	P	L	L	W	Q	M	N	T	A	H	A	A	A	I	D	P	N	R	I	V	A	L	E	W	L	P	.	.	.	.	.	.	.	.	.	V	E	L	L	L	A	L	G	I	V	P	Y	G	V	A	D	T	I	N	Y	R	L	W	V	S	E	P	P	L	P	D	S	V	I
Query Conservation																																							.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	G	F	A	A	A	V	K	A	I	V	E	T	L	V	P	E	R	R	D	Q	V	G	K	R	P	R	Q	V	N	V	L	C	S	A	N	L	T	P	G	D	L	E	Y	I	A	E	S	I	E	S	F	G	L	R	P	L	L	I	P	D	L	S	G	S	L	D	G	H	L	D	E	N	R	F	N	A	L	T
Template Known Secondary structure																S	S		S	S	S		T	T				S	S								T	T															T	T	T							S						S	S	S				S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.
Predicted Secondary structure																		.																																																						.	.
Query SS confidence																		.																																																						.	.
Query Sequence		D	V	G	L	R	T	E	P	N	L	E	L	L	T	E	M	.	K	P	S	F	M	V	W	S	A	G	Y	G	P	S	P	E	M	L	A	R	I	A	P	G	R	G	F	N	F	S	D	G	K	Q	P	L	A	M	A	R	K	S	L	T	E	M	A	D	L	L	N	L	Q	.	.	S	A	A	E	T	H	L	A
Query Conservation																		.																																																						.	.
Alig confidence						.	.	.	.									.																																																						.	.
Template Conservation						.	.	.	.
Template Sequence		T	G	G	L	.	.	.	.	S	V	A	E	L	A	T	A	G	Q	S	V	A	T	L	V	V	G	Q	S	L	A	G	A	A	D	A	L	A	E	R	T	G	V	P	D	R	R	F	G	M	L	Y	G	L	D	A	V	D	A	W	L	M	A	L	A	E	I	S	G	N	P	V	P	D	R	Y	K	R	Q	R	A
Template Known Secondary structure		S		S	B	.	.	.	.						G	G	G	S	S		S						S	G	G	G											S										S																		S	S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		223	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.													220	.
Predicted Secondary structure																																											.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Y	E	D	F	I	R	S	M	K	P	R	F	V	K	R	G	A	R	P	L	L	L	T	T	L	I	D	P	R	H	M	L	V	F	G	P	N	S	L	F	.	.	.	Q	E	I	L	D	E	Y	G	I	P	N	A	W	Q	G	E	T	N	F	W	G	S	.	.	.	.	.	.	.	.	.	.	.	.	T	A
Query Conservation																																											.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	Q	D	A	M	L	D	T	H	F	M	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	R	T	A	I	A	A	D	P	D	L	L	L	G	F	D	A	L	L	R	S	M	G	A	H	T	V	A	A	V	V	P	A	R	A	A	A	L	V	D	S	P	L	P	S	V	R	V	G	D	L
Template Known Secondary structure															T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																					T	T	T									S	S			S			T	T	T	T	S	S					S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.															.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	I	D	R	L	A	A	Y	K	D	V	D	V	L	C	F	D	H	D	N	S	K	D	M	D	A	L	M	A	T	P	L	W	Q	A	M	P	F	V	R	A	G	R	F	Q	R	V	P	A	V	W	F	Y	G	A	T	L	S	A	M	H	F	V	R	V	L	D	N	A	I
Query Conservation
Alig confidence																																																	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		E	D	L	E	H	A	A	R	A	G	Q	A	Q	L	V	I	G	N	S	H	A	L	A	S	A	R	R	L	G	V	P	L	L	R	A	G	F	P	Q	Y	D	L	L	G	G	F	Q	.	.	.	.	R	C	W	S	G	Y	R	G	S	S	Q	V	L	F	D	L	A	N	L	L
Template Known Secondary structure												T		S						T	T								T	T							S	S			T	T		T	T	G	G	G	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.					.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions