Job Description P07822 Confidence 100.00% Date Thu Jan 5 11:00:35 GMT 2012 Rank 10 Aligned Residues 255 % Identity 16% Template c3mwgA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:iron-regulated abc transporter siderophore-binding protein PDBTitle: crystal structure of staphylococcus aureus sira Resolution 2.10 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		N	R	I	V	A	L	E	W	L	P	V	E	L	L	L	A	L	G	I	V	P	Y	G	V	A	D	T	I	N	Y	R	L	W	V	S	E	.	P	P	L	P	D	S	V	I	D	V	G	L	R	T	E	P	N	L	E	L	L	T	E	M	K	P	S	F	M	V	W	S	A	G	Y	G	P	S	P	E	M	L	A
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		K	R	V	V	T	L	Y	Q	G	A	T	D	V	A	V	S	L	G	V	K	P	V	G	A	V	E	S	W	T	Q	K	P	K	F	E	Y	I	K	N	D	L	K	D	T	K	I	V	G	Q	E	P	A	P	N	L	E	E	I	S	K	L	K	P	D	L	I	V	A	S	K	V	R	N	E	K	V	Y	D	Q	L
Template Known Secondary structure								S										T	T				S						S	S	S	T	T	S		T	T	T	G	G	G	G	T	T							T	T										T			S										G	G	G
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		R	I	A	P	G	R	G	F	N	F	S	D	G	K	Q	P	L	A	M	A	R	K	S	L	T	E	M	A	D	L	L	N	L	Q	S	A	A	E	T	H	L	A	Q	Y	E	D	F	I	R	S	M	K	P	R	F	V	K	.	.	R	G	A	R	P	L	L	L	T	T	L	I	D	P	R	H	M	L	V	F	G
Query Conservation																																																											.	.
Alig confidence															.	.	.	.	.																																								.	.
Template Conservation															.	.	.	.	.
Template Sequence		S	K	I	A	P	T	V	S	T	D	T	V	F	.	.	.	.	.	K	F	K	D	T	T	K	L	X	G	K	A	L	G	K	E	K	E	A	E	D	L	L	K	K	Y	D	D	K	V	A	A	F	Q	K	D	A	K	A	K	Y	K	D	A	W	P	L	K	A	S	V	V	N	F	R	A	D	H	T	R	I	Y
Template Known Secondary structure					S						S	S	S	S	.	.	.	.	.														T																												G	G	G		S		B								S	S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.									.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																							.	.	.	.																														.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																														.	.	.	.	.	.	.	.
Query Sequence		P	N	S	L	F	Q	E	I	L	D	E	Y	G	I	P	N	A	W	Q	G	E	.	.	.	.	T	N	F	W	G	S	T	A	V	S	I	D	R	L	A	A	Y	K	D	V	D	V	L	C	F	D	H	D	N	.	.	.	.	.	.	.	.	S	K	D	M	D	A	L	M	A	T	P	L	W	Q	A	M	P	F
Query Conservation																							.	.	.	.																														.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	G	Y	A	G	E	I	L	N	D	L	G	F	K	R	N	K	D	L	Q	K	Q	V	D	N	G	K	D	I	I	Q	L	T	S	K	E	S	I	P	L	X	N	A	D	H	I	F	V	V	K	S	D	P	N	A	K	D	A	A	L	V	K	K	T	E	S	E	W	T	S	S	K	E	W	K	N	L	D	A
Template Known Secondary structure		S	S										T	T		B											T	T		S							G	G	G	G	G	G	G			S									T	T	S	T	T														S						S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		V	R	A	G	R	F	Q	R	V	P	A	.	.	.	V	W	F	Y	G	A	T	L	S	A	M	H	F	V	R	V	L	D	N	A	I	G	G	K
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		V	K	N	N	Q	V	S	D	D	L	D	E	I	T	W	N	L	A	G	G	Y	K	S	S	L	K	L	I	D	D	L	Y	E	K	L	N	I	E
Template Known Secondary structure				T	T												T	T	S		S															T	T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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