Job Description P07822 Confidence 100.00% Date Thu Jan 5 11:00:35 GMT 2012 Rank 8 Aligned Residues 246 % Identity 17% Template c3md9A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hemin-binding periplasmic protein hmut; PDBTitle: structure of apo form of a periplasmic heme binding protein Resolution 1.50 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		N	R	I	V	A	L	E	W	L	P	V	E	L	L	L	A	L	G	I	.	.	V	P	Y	G	V	A	D	T	I	N	Y	R	L	W	V	S	E	P	P	L	P	D	S	V	I	D	V	G	L	R	T	E	P	N	L	E	L	L	T	E	M	K	P	S	F	M	V	W	S	A	G	Y	G	P	S	P	E	M	L
Query Conservation																					.	.
Alig confidence																					.	.										.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		E	R	I	V	T	I	G	G	D	V	T	E	I	A	Y	A	L	G	A	G	D	E	I	V	A	R	D	S	T	S	.	.	.	.	.	.	Q	Q	P	Q	A	A	Q	K	L	P	D	V	G	Y	M	R	T	L	N	A	E	G	I	L	A	M	K	P	T	M	L	L	V	S	E	L	A	Q	P	S	L	V	L	T
Template Known Secondary structure								S										T	T		G	G	G						T	T		.	.	.	.	.	.			S	G	G	G	G	G	S		B				T	T	S								T	T			S						T	T		S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	I	A	P	G	R	G	F	N	F	S	D	G	K	Q	P	L	A	M	A	R	K	S	L	T	E	M	A	D	L	L	N	L	Q	S	A	A	E	T	H	L	A	Q	Y	E	D	F	I	R	S	M	K	P	R	F	V	K	R	G	A	R	P	L	L	L	T	T	L	I	D	P	R	H	M	L	V	F	G	P
Query Conservation
Alig confidence																																																											.	.	.
Template Conservation																																																											.	.	.
Template Sequence		Q	I	A	S	S	G	V	N	V	V	T	V	P	G	Q	T	T	P	E	S	V	A	M	K	I	N	A	V	A	T	A	L	H	Q	T	E	K	G	Q	K	L	I	E	D	Y	Q	Q	R	L	A	A	V	N	K	T	P	L	.	.	.	P	V	K	V	L	F	V	M	S	H	G	G	L	T	P	M	A	A	G	Q
Template Known Secondary structure						T	T											S																T																		T	S			S			.	.	.	S										S	S	S							B
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		N	S	L	F	Q	E	I	L	D	E	Y	G	I	P	N	A	W	Q	G	E	T	N	F	W	G	S	T	A	V	S	I	D	R	L	A	A	Y	K	D	V	D	V	L	C	F	D	H	D	N	S	K	D	.	.	M	D	A	L	M	A	T	P	L	W	Q	A	M	P	F	V	R	A	G	R	F	Q	R	V	P	A
Query Conservation																																																						.	.
Alig confidence																				.	.	.																																.	.
Template Conservation																				.	.	.
Template Sequence		N	T	A	A	D	A	M	I	R	A	A	G	G	S	N	A	M	Q	.	.	.	G	F	S	R	Y	R	P	L	S	Q	E	G	V	I	A	S	A	P	D	L	L	L	I	T	T	D	G	V	K	A	L	G	S	S	E	N	I	W	K	L	P	G	M	A	L	T	P	A	G	K	H	K	R	L	L	V	V	D	D
Template Known Secondary structure		S	S									T	T				S			.	.	.	S		B	S															S													S	S	G	G	G	G	G	G	S	T	T	G	G	G	S					T	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	F	Y	G	A	T	L	S	A	M	H	F	V	R	V	L	D	N	A	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	L	L	G	F	G	L	E	T	P	Q	V	L	A	Q	L	R	E	K	M	E
Template Known Secondary structure						S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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