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Job Description | P07822 | Confidence | 19.69% | Date | Thu Jan 5 11:00:35 GMT 2012 |
Rank | 68 | Aligned Residues | 99 |
% Identity | 10% | Template | c3dapB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:diaminopimelic acid dehydrogenase; |
PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline
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Resolution | 2.20 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
R | I | V | A | L | E | W | L | P | V | E | L | L | L | A | L | G | I | . |
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V | P | Y | G | V | A | D | T | I | N | Y | R | L | W | V | S | E | P | P | L | P | D | S | V | I | D | V | G | L | R | T | E | P | N | L | E | L | L | T | E | M | K | P | S | F | M | V | W | S | A | G | Y | G | P | S | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | V | A | I | V | G | Y | G | N | L | G | R | S | V | E | K | L | I | A | K | Q | P | D | M | D | L | V | G | I | F | S | R | R | . |
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A | T | L | D | T | K | T | P | V | F | D | V | A | D | V | D | K | H | A | D | . |
D | V | D | V | L | F | L | C | M | G | S | A | T | D | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
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. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | M | L | A | R | I | . |
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A | P | G | R | G | F | N | F | S | D | G | K | Q | P | L | A | M | A | R | K | S | L | T | E | M | A | D | L | L | N | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | E | Q | A | P | K | F | A | Q | F | A | C | T | V | D | T | Y | D | N | H | R | D | I | P | R | H | R | Q | V | M | N | E | A | A | T | A | A | G | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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