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Job DescriptionP07822
Confidence19.69%DateThu Jan 5 11:00:35 GMT 2012
Rank68Aligned Residues99
% Identity10%Templatec3dapB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:diaminopimelic acid dehydrogenase; PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.... .....60.........70.........80.........90.........100.........110
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Query Sequence  RIVALEWLPVELLLALGI. . . . . . VPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSP
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Template Sequence  RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR. . . . . . . . . . . ATLDTKTPVFDVADVDKHAD. DVDVLFLCMGSATDI
Template Known Secondary structure 

STT
SSS
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SSSS
GGGGGGGTT.T
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S
TTT
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   5....10.........20.........30....... ..40.........50....... ..60.........70..
 
   111..... ...120.........130.........140.......
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Query Sequence  EMLARI. . APGRGFNFSDGKQPLAMARKSLTEMADLLNL
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Template Sequence  PEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGN
Template Known Secondary structure  TTTS




GGGT
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   73......80.........90.........100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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