Job Description P07822 Confidence 91.72% Date Thu Jan 5 11:00:35 GMT 2012 Rank 25 Aligned Residues 214 % Identity 14% Template c3aerC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	L	A	L	G	I	V	P	Y	G	V	A	D	T	I	N	Y	R	L	W	V	S	E	P	P	L	P	D	S	V	I	D	V	G	L	R	T	E	P	N	L	E	L	L	T	E	M	K	P	S	F	M	V	W	S	A	G	Y	G	P	S	P	E	M	L	A	R	I	A	P	G	R	G	F	N	F	S	D
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		S	L	L	T	Q	L	G	V	G	P	V	R	M	L	P	A	R	R	S	D	I	E	P	A	V	G	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	F	I	L	A	Q	P	F	L	G	E	T	T	G	A	L	E	R	R	.	G	A	K	R	I	A	A	P
Template Known Secondary structure							T	T			S					S		S	S	G	G	G				B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	T	T										T	T	.	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																								.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		G	K	Q	P	L	A	M	A	R	K	S	L	T	E	M	A	D	L	L	N	L	Q	.	S	A	A	E	T	H	L	A	Q	Y	E	D	F	I	R	S	M	K	P	R	F	V	K	R	G	A	R	P	L	L	L	T	T	L	I	D	P	R	H	M	L	V	F	G	P	N	S	L	F	Q	E	I	L	D	E	Y	G
Query Conservation																								.
Alig confidence																								.																																						.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		F	P	F	G	E	E	G	T	T	L	W	L	K	A	V	A	D	A	Y	G	V	S	A	E	K	F	E	A	V	T	A	A	P	R	A	R	A	K	K	A	I	A	A	H	L	E	T	L	T	G	K	S	L	F	M	F	P	D	S	Q	.	.	.	.	.	.	L	E	I	P	L	A	R	F	L	A	R	E	C	G
Template Known Secondary structure			S																T	T	T																													T	T								S	S	S	.	.	.	.	.	.												T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.							.	.	.	.	.	310	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.								.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.																										.	.
Query SS confidence																																																.	.	.	.	.	.	.																										.	.
Query Sequence		I	P	N	A	W	Q	G	E	T	N	F	W	G	S	T	A	V	S	I	D	R	L	A	A	Y	K	D	V	D	V	L	C	F	D	H	D	N	S	K	D	M	D	A	L	M	A	.	.	.	.	.	.	.	T	P	L	W	Q	A	M	P	F	V	R	A	G	R	F	Q	R	V	P	A	V	W	F	Y	G	.	.
Query Conservation																																																.	.	.	.	.	.	.																										.	.
Alig confidence						.	.																																									.	.	.	.	.	.	.																										.	.
Template Conservation						.	.
Template Sequence		M	K	T	T	.	.	E	I	A	T	P	F	L	H	K	A	I	M	A	P	D	L	A	L	L	P	S	N	T	A	L	T	E	G	Q	D	L	E	A	Q	L	D	R	H	E	A	I	N	P	D	L	T	V	C	G	L	G	L	A	N	P	L	E	A	K	G	H	A	T	K	W	A	I	E	L	V	F	T	P	V
Template Known Secondary structure						.	.					S				T	T	T	T					T	T	S		T	T																						S														T	T	T						S	G	G	G	G	T	S
Template Predicted Secondary structure						.	.
Template SS confidence
		319	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
			277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	T	L	S	A	M	H	F	V	R	V	L	D	N	A	I
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		H	F	Y	E	Q	A	G	D	L	A	G	L	F	S	R	P	L
Template Known Secondary structure		S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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