Job Description P07822 Confidence 38.69% Date Thu Jan 5 11:00:35 GMT 2012 Rank 53 Aligned Residues 126 % Identity 15% Template c2xdqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	L	A	L	G	I	V	P	Y	G	V	A	D	T	I	N	Y	R	L	W	V	S	E	P	P	L	P	D	S	V	I	D	V	G	L	R	T	E	P	N	L	E	L	L	T	E	M	K	P	S	F	M	V	W	S	A	G	Y	G	P	S	P	E	M	L	A	R	I	A	P	G	R	G	F	N	F	S	D
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	L	K	K	Q	G	I	K	V	S	G	W	L	P	A	K	R	Y	T	E	L	P	V	I	D	E	G	Y	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	V	N	P	F	L	S	R	T	A	T	T	L	I	R	R	R	K	C	Q	L	I	T	A	P	F
Template Known Secondary structure					G	G	G	T								S		S	S	G	G	G						T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	T	T											T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.
Predicted Secondary structure																										.																																																.	.	.
Query SS confidence																										.																																																.	.	.
Query Sequence		G	K	Q	P	L	A	M	A	R	K	S	L	T	E	M	A	D	L	L	N	L	Q	S	A	.	A	E	T	H	L	A	Q	Y	E	D	F	I	R	S	M	K	P	R	F	V	K	R	G	A	R	P	L	L	L	T	T	L	I	D	P	R	H	M	L	V	F	G	P	N	S	L	F	.	.	.	Q	E	I	L	D
Query Conservation																										.																																																.	.	.
Alig confidence		.																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	P	I	G	P	D	G	T	R	T	W	I	E	Q	I	C	A	T	F	G	I	Q	P	Q	G	L	A	E	R	E	A	E	T	W	Q	K	L	S	D	Y	L	E	L	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	S	V	F	F	M	G	D	N	L	L	E	I	S	L	A	R	F	L	I
Template Known Secondary structure		.	S	B																T	T					S											T	T								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									S	S
Template Predicted Secondary structure		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.															.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		203	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	G	I	P	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	C	G	M	R	V	L
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions