Job Description P07822 Confidence 100.00% Date Thu Jan 5 11:00:35 GMT 2012 Rank 5 Aligned Residues 248 % Identity 17% Template c2r7aC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:bacterial heme binding protein; PDBTitle: crystal structure of a periplasmic heme binding protein2 from shigella dysenteriae Resolution 2.05 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.
Predicted Secondary structure																							.	.																																																				.
Query SS confidence																							.	.																																																				.
Query Sequence		N	R	I	V	A	L	E	W	L	P	V	E	L	L	L	A	L	G	I	V	P	.	.	Y	G	V	A	D	T	I	N	Y	R	L	W	V	S	E	P	P	L	P	D	S	V	I	D	V	G	L	R	T	E	P	N	L	E	L	L	T	E	M	K	P	S	F	M	V	W	S	A	G	Y	G	.	P	S	P	E	M
Query Conservation																							.	.																																																				.
Alig confidence																							.	.								.	.	.	.	.	.																																							.
Template Conservation																																.	.	.	.	.	.
Template Sequence		E	R	I	V	V	A	G	G	S	L	T	E	L	I	Y	A	M	G	A	G	E	R	V	V	G	V	D	E	T	T	.	.	.	.	.	.	S	Y	P	P	E	T	A	K	L	P	H	I	G	Y	W	K	Q	L	S	S	E	G	I	L	S	L	R	P	D	S	V	I	T	W	Q	D	A	G	P	Q	I	V	L	D
Template Known Secondary structure								S										T	T		G	G	G						T	T		.	.	.	.	.	.			S	G	G	G	T	T	S		B		S	B	T	T	B								T	T			S						T	T		S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		L	A	R	I	A	P	G	R	G	F	N	F	S	D	G	K	Q	P	L	A	M	A	R	K	S	L	T	E	M	A	D	L	L	N	L	Q	S	A	A	E	T	H	L	A	Q	Y	E	D	F	I	R	S	M	K	P	R	F	V	K	R	G	A	R	P	L	L	L	T	T	L	.	I	D	P	R	H	M	L	V	F
Query Conservation																																																																								.
Alig confidence																																																																								.
Template Conservation
Template Sequence		Q	L	R	A	Q	K	V	N	V	V	T	L	P	R	V	P	A	T	L	E	Q	M	Y	A	N	I	R	Q	L	A	K	T	L	Q	V	P	E	Q	G	D	A	L	V	T	Q	I	N	Q	R	L	E	R	V	Q	Q	N	V	A	A	K	K	A	P	V	K	A	M	F	I	L	S	A	G	G	S	A	P	Q	V	A
Template Known Secondary structure						T	T										S																	T	T																										S	S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	N	S	L	F	Q	E	I	L	D	E	Y	G	I	P	N	A	W	Q	G	E	T	N	F	W	G	S	T	A	V	S	I	D	R	L	A	A	Y	K	D	V	D	V	L	C	F	D	H	D	N	S	K	D	M	D	A	L	M	A	T	P	L	W	Q	A	M	P	F	V	R	A	G	R	F	Q	R	V	P	A
Query Conservation
Alig confidence																							.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		G	K	G	S	V	A	D	A	I	L	S	L	A	G	A	E	N	V	A	T	H	.	.	.	.	Q	Q	Y	K	S	Y	S	A	E	S	L	I	A	A	N	P	E	V	I	V	V	T	S	Q	M	V	D	G	D	I	N	R	L	R	S	I	A	G	I	T	H	T	A	A	W	K	N	Q	R	I	I	T	V	D	Q
Template Known Secondary structure			B	T	S										T							S	.	.	.	.	B	S															S										T	T		G	G	G	G	G	G	S	T	T	G	G	G	S					T	T							G
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	F	Y	G	A	T	L	S	A	M	H	F	V	R	V	L	D	N	A	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	I	L	G	M	G	P	R	I	A	D	V	V	E	S	L	H	Q	Q	L	W
Template Known Secondary structure		G	G	S	S	S			T	T													S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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