Job Description P07822 Confidence 100.00% Date Thu Jan 5 11:00:35 GMT 2012 Rank 7 Aligned Residues 252 % Identity 22% Template c2r79A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein; PDBTitle: crystal structure of a periplasmic heme binding protein from2 pseudomonas aeruginosa Resolution 2.40 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		P	N	R	I	V	A	L	E	W	L	P	V	E	L	L	L	A	L	G	I	.	.	V	P	Y	G	V	A	D	T	I	N	Y	R	L	W	V	S	E	P	P	L	P	D	S	V	I	D	V	G	L	R	T	E	P	N	L	E	L	L	T	E	M	K	P	S	F	M	V	W	S	A	G	Y	G	P	S	P	E	M
Query Conservation																						.	.
Alig confidence																						.	.										.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		P	Q	R	W	V	S	A	G	G	S	L	S	E	W	V	V	A	L	G	G	E	S	K	L	V	G	V	D	T	T	S	.	.	.	.	.	.	Q	H	P	Q	A	L	K	Q	L	P	S	V	G	Y	Q	R	Q	L	A	A	E	G	V	L	A	L	R	P	D	I	L	I	G	T	E	E	M	G	P	P	P	V	L
Template Known Secondary structure				S					S										T	T		G	G	G						T	T		.	.	.	.	.	.			S	G	G	G	G	G	S		B				G	G	G								T	T			S						T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		L	A	R	I	A	P	G	R	G	F	N	F	S	D	G	K	Q	P	L	A	M	A	R	K	S	L	T	E	M	A	D	L	L	N	L	Q	S	A	A	E	T	H	L	A	Q	Y	E	D	F	I	R	S	M	K	P	R	F	V	K	R	G	A	R	P	.	.	.	.	L	L	L	T	T	L	I	D	P	R	H	M
Query Conservation																																																																		.	.	.	.
Alig confidence																																																																		.	.	.	.
Template Conservation
Template Sequence		K	Q	L	E	G	A	G	V	R	V	E	T	L	S	A	K	P	D	L	E	A	L	E	S	N	L	K	K	L	G	D	W	L	G	V	P	Q	R	A	E	A	A	E	L	D	Y	R	Q	R	L	R	R	Q	A	D	W	I	A	A	A	Q	K	S	Q	P	A	P	G	V	L	L	V	I	G	N	A	G	G	Q	L
Template Known Secondary structure							T	T										S	S																T																											T	T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		L	V	F	G	P	N	S	L	F	Q	E	I	L	D	E	Y	G	I	P	N	A	W	Q	G	E	T	N	F	W	G	S	T	A	V	S	I	D	R	L	A	A	Y	K	D	V	D	V	L	C	F	D	H	D	N	S	.	.	.	K	D	M	D	A	L	M	A	T	P	L	W	Q	A	M	P	F	V	R	A	G	R
Query Conservation																																																									.	.	.
Alig confidence																										.	.	.	.																												.	.	.
Template Conservation																										.	.	.	.
Template Sequence		L	V	A	G	R	N	T	G	G	D	W	V	L	N	R	A	G	A	R	N	L	A	T	H	.	.	.	.	E	G	Y	K	P	I	S	V	E	A	L	A	A	L	D	P	V	A	V	V	I	A	D	R	S	L	E	G	D	A	A	R	A	A	L	L	K	Q	N	P	G	L	A	P	T	R	A	A	R	D	G	R
Template Known Secondary structure						B	S	S									T	T							S	.	.	.	.	B	S															S							S	S															G	G	G	T	T	S					T	T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		F	Q	R	V	P	A	V	W	F	Y	G	A	T	.	L	S	A	M	H	F	V	R	V	L	D	N	A	I	G	G	K	A
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		L	L	V	L	D	P	T	L	L	V	G	G	L	G	P	R	L	P	D	G	L	A	A	L	S	A	A	F	Y	P	S	A
Template Known Secondary structure							G	G	G	G	S	S	S	S		T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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