Job Description P07822 Confidence 32.32% Date Thu Jan 5 11:00:35 GMT 2012 Rank 57 Aligned Residues 188 % Identity 15% Template c2ov3A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein component of an abc PDBTitle: crystal structure of 138-173 znua deletion mutant plus zinc2 bound Resolution 2.40 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																			130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure															.							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	E	P	N	L	E	L	L	T	E	M	K	.	P	S	F	M	V	W	.	.	S	A	G	Y	G	P	S	P	E	M	L	A	R	I	A	P	G	R	G	F	N	F	S	D	G	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	A	M	A	R	K	S	L	T	E	M	A
Query Conservation															.							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Y	E	P	K	P	Q	Q	L	A	A	L	S	E	A	E	A	Y	V	L	I	G	L	G	F	E	Q	P	W	L	E	K	L	K	A	A	N	A	N	M	K	L	I	D	S	A	Q	G	I	T	P	L	E	M	P	G	R	L	M	V	A	D	P	H	I	W	L	S	P	T	L	V	K	R	Q	A	T	T	I	A
Template Known Secondary structure		G											G	G	G		S							T	T	S	S	T	T	T									S	S	S					T	T	T	T					B		S	S	S	T	T	S	B				G	G	G
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		143	.	.	.	.	.										.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		D	L	L	N	L	Q	.	.	.	.	.	.	.	.	.	S	A	A	E	T	H	L	A	Q	Y	E	D	F	I	R	S	M	K	P	R	F	V	K	R	G	A	R	P	L	L	L	T	T	L	I	D	P	R	H	M	L	V	F	G	P	N	S	L	F	Q	E	I	L	D	E	Y	G	I	P	N	A	W	Q	G	E
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	L	A	E	L	D	P	D	N	R	D	Q	Y	E	A	N	L	A	A	F	L	A	E	L	E	R	L	N	Q	E	L	G	Q	I	L	Q	P	L	P	Q	R	K	F	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	P	S	W	A	Y	F	A	R	D	Y	N	L	V	Q	I	P	I	E	V
Template Known Secondary structure									G	G	G																											T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										T	T						S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.														.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		T	N	F	W	G	S	T	A	V	S	I	D	R	L	A	A	Y	.	.	.	.	K	D	V	D	V	L	C	F	D	H	D	N	S	K	D	M	D	A	L	M	A	T	P	L	W	Q	A	M	P	F	V	R	A	G	R	F	Q	R	V	P	A	V	W	F	Y	G	A	T	L	S	A	M	H	F	V	R	V	L	D
Query Conservation																			.	.	.	.
Alig confidence										.									.	.	.	.																										.	.	.	.	.	.	.	.	.											.
Template Conservation										.																																						.	.	.	.	.	.	.	.	.											.
Template Sequence		E	G	Q	E	P	S	A	Q	.	E	L	K	Q	L	I	D	T	A	K	E	N	N	L	T	M	V	F	G	E	T	Q	F	S	T	K	S	S	E	A	I	A	A	E	I	G	A	.	.	.	.	.	.	.	.	.	G	V	E	L	L	D	P	L	A	A	.	D	W	S	S	N	L	K	A	V	A	Q	K	I	A
Template Known Secondary structure		S	S	S				T	T	.													T								T	T	S													T		.	.	.	.	.	.	.	.	.							T	T		S	.	S
Template Predicted Secondary structure										.																																						.	.	.	.	.	.	.	.	.											.
Template SS confidence
		263	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.										.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.
		290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	I	G	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	N	S	A	Q
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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