Job Description P07822 Confidence 31.97% Date Thu Jan 5 11:00:35 GMT 2012 Rank 58 Aligned Residues 104 % Identity 9% Template c2o1eB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:ycdh; PDBTitle: crystal structure of the metal-dependent lipoprotein ycdh2 from bacillus subtilis, northeast structural genomics3 target sr583 Resolution 2.60 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																								.	.	.	.																						.
Query SS confidence																								.	.	.	.																						.
Query Sequence		M	L	V	F	G	P	N	S	L	F	Q	E	I	L	D	E	Y	G	I	P	N	A	.	.	.	.	W	Q	G	E	T	N	F	W	G	S	T	A	V	S	I	D	R	L	A	A	Y	.	K	D	V	D	V	L	C	F	D	H	D	N	S	K	D	M	D	A	L	M	A	T	P	L	W	Q	A	M	P	F	V	R
Query Conservation																								.	.	.	.																						.
Alig confidence																								.	.	.	.																						.
Template Conservation
Template Sequence		L	H	V	V	T	T	F	Y	P	X	Y	E	F	T	K	Q	I	V	K	D	K	G	D	V	D	L	L	I	P	S	S	V	E	P	H	D	W	E	P	T	P	K	D	I	A	N	I	Q	D	A	D	L	F	V	Y	N	S	E	Y	X	E	T	W	V	P	S	A	E	K	S	X	G	Q	G	H	A	V	F	V	N
Template Known Secondary structure							S	S												G	G	G						S	S		T	T	S		T	T	T														S	S					S		T	T	T	S	T	T							T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		263	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		A	G	R	F	Q	R	V	.	.	.	.	.	P	A	V	W	F	Y	G	A	T	L	S	A	M	H	F	V	R	V	L	D	N	A	I
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.							.
Template Conservation																				.
Template Sequence		A	S	K	G	I	D	L	X	E	G	A	X	D	P	H	V	W	L	.	S	P	V	L	A	Q	K	E	V	K	N	I	T	A	Q	I
Template Known Secondary structure		T	T	T	T					B			B			G	G	G	G	.	S
Template Predicted Secondary structure																				.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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