Return to main results Retrieve Phyre Job Id

Job DescriptionP76299
Confidence99.96%DateThu Jan 5 12:21:41 GMT 2012
Rank4Aligned Residues91
% Identity31%Templatec3t7yB_
PDB info PDB header:protein transportChain: B: PDB Molecule:yop proteins translocation protein u; PDBTitle: structure of an autocleavage-inactive mutant of the cytoplasmic domain2 of ct091, the yscu homologue of chlamydia trachomatis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280.........290.........300.........310.........320.........330......
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  ADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLY
Query Conservation    
  









 



 

     

 




 
  
  

 

 
  





 






  
 

  

 


Alig confidence 















































































Template Conservation    
  
  

 



 



 

     

 




 
  
  
   
   



  
  


 

     
  

 


Template Sequence  SQIKHASAVVSAPKDIAVAIGYMPEKYKAPWIIAMGVNLRAKRIIAEAEKYGVPIMRNVPLAHQLLDEGKELKFIPETTY
Template Known Secondary structure  TSGGG
STTT

TTT
SS
T




BTSB

GGG
Template Predicted Secondary structure 

































Template SS confidence 















































































   251........260.........270.........280.........290.........300.........310.........320.........330
 
   337..340.......
Predicted Secondary structure 
Query SS confidence 










Query Sequence  AAVAEVLAWVW
Query Conservation   


 


 
 
Alig confidence 










Template Conservation   


 

  

Template Sequence  EAVGEILLYIT
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 










   331........340.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions