 |
Job Description | P0A8V2 | Confidence | 14.32% | Date | Wed Jan 25 15:20:19 GMT 2012 |
Rank | 47 | Aligned Residues | 23 |
% Identity | 22% | Template | c6paxA_ |
PDB info |
PDB header:gene regulation/dna | Chain: A: PDB Molecule:homeobox protein pax-6; |
PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
|
Resolution | 2.50 Å |
|
  |   |
1097 | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | N | P | L | G | V | P | S | R | M | N | I | G | Q | I | L | E | T | H | L | G | M |
Query Conservation |   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |
Template Sequence |   |
V | C | T | N | D | N | I | P | S | V | S | S | I | N | R | V | L | R | N | L | A | S | E |
Template Known Secondary structure |   |
S | S |
| T | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|