Job Description P0A8V2 Confidence 17.61% Date Wed Jan 25 15:20:19 GMT 2012 Rank 37 Aligned Residues 32 % Identity 19% Template c3kdeC_ PDB info PDB header:dna binding protein/dna Chain: C: PDB Molecule:transposable element p transposase; PDBTitle: crystal structure of the thap domain from d. melanogaster p-element2 transposase in complex with its natural dna binding site Resolution 1.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1075	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	S	K	I	N	P	I	E	D	M	P	Y	D	E	N	G	T	P	V	D	I	V	L	N	P	L	G	V	P	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	D	T	H	F	N	D	S	Q	W	K	A	A	K	G	Q	T	F	K	R	R	R	L	N	A	D	A	V	P	S	K
Template Known Secondary structure				G	G	G	S		G	G	G	B									S	S			B		T	T
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions