 |
Job Description | P0A8V2 | Confidence | 12.10% | Date | Wed Jan 25 15:20:19 GMT 2012 |
Rank | 58 | Aligned Residues | 55 |
% Identity | 16% | Template | c3dlmA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:histone-lysine n-methyltransferase setdb1; |
PDBTitle: crystal structure of tudor domain of human histone-lysine n-2 methyltransferase setdb1
|
Resolution | 1.77 Å |
|
 |
  |   |
710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | S | G | V | T | A | V | A | K | R | G | G | V | V | Q | Y | V | D | A | S | R | I | V | I | K | V | N | E | D | E | M | . |
. |
. |
. |
. |
. |
. |
Y | P | G | E | A | G | I | D | I | Y | N | L | T | K | Y | T | R | S | N | Q | N | T | C | I | N | Q | M | P | C | V | S | L | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|
|   |   |
|
Template Sequence |   |
K | N | K | L | R | F | L | I | F | F | D | D | G | Y | A | S | Y | V | T | Q | S | E | L | Y | P | I | C | R | P | L | K | K | T | W | E | D | I | E | D | I | S | C | R | D | F | I | E | E | Y | V | T | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | P | N | R | P | M | V | L | L | K |
Template Known Secondary structure |   |
T | T | T | S |
|  |  |  |  |  | T | T | S |
|  |  |  |  |
| G | G | G |  |  |  | B | S | S |
|
| S | S | G | G | G | G |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | T | T |
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 160 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|