Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8V2
Confidence16.19%DateWed Jan 25 15:20:19 GMT 2012
Rank40Aligned Residues79
% Identity25%Templatec2hsiB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:putative peptidase m23; PDBTitle: crystal structure of putative peptidase m23 from2 pseudomonas aeruginosa, new york structural genomics3 consortium
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   708.710.........720.........730.........740.........750.........760.........770.........780....
Predicted Secondary structure 
























































...
Query SS confidence 












































































. . .
Query Sequence  VAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLA. . .
Query Conservation                
 
 
 
   
                  
 
      

    

 


 
      
  
 ...
Alig confidence 
























..



















............

















...
Template Conservation 
 
  



 
   
 
  

    .. 
  


 

 
  
 
 

............  
 
  

 
  

 

 

Template Sequence  FAVPAGTPIKAPAAGKVILIGDYFF. . NGKTVFVDHGQGFISMFCHL. . . . . . . . . . . . SKIDVKLGQQVPRGGVLGKVG
Template Known Secondary structure 


TT

SS
TT..TTT............S
S
TT

TT


Template Predicted Secondary structure 












..






............











Template SS confidence 















































































   185....190.........200......... 210.........220......... 230.........240.........250
 
   785....790.........800
Predicted Secondary structure  .....













Query SS confidence  . . . . .















Query Sequence  . . . . . DGPSTDLGELALGQNM
Query Conservation  .....
       


 
 

Alig confidence  .....















Template Conservation   

 









   
  
Template Sequence  ATGRATGPHMHWNVSLNDARV
Template Known Secondary structure 
TTT
SS

TT
Template Predicted Secondary structure 









Template SS confidence 




















   251........260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions