Job Description P0A8V2 Confidence 50.32% Date Wed Jan 25 15:20:19 GMT 2012 Rank 14 Aligned Residues 70 % Identity 20% Template c1gjjA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lap2; PDBTitle: n-terminal constant region of the nuclear envelope protein2 lap2 Resolution UNK

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		1085	.		.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	P	.	Y	D	E	N	G	T	P	V	D	I	V	L	N	P	L	G	V	P	S	R	M	N	I	G	Q	I	L	E	T	H	L	G	M	A	A	K	G	I	G	D	K	I	N	A	M	L	K	Q	Q	Q	E	V	A	K	L	R	E	F	I	Q	R	A	Y	D	L	G	A	D	V	R	Q	K	V	D	L	S	T
Query Conservation				.
Alig confidence				.					.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.						.	.																									.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.						.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		M	P	E	F	L	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	V	L	T	K	D	K	L	K	S	E	L	V	A	.	.	.	.	.	N	N	V	T	L	.	.	P	A	G	E	Q	R	K	D	V	Y	V	Q	L	Y	L	Q	H	L	T	A	R	N	R	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S		.	.	.	.	.	.	.	.	.	.	.	.	.	B															.	.	.	.	.	T	T				.	.		S	S														B	B	T	T	T				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.						.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.														.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
		1164	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	D	E	E	V	M	R	L	A	E	N	L	R	K	G	M	P	I	A	T	P	V	F	D	G	A	K	E	A	E	I	K	E	L	L	K	L	G	D	L	P	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	E	L	T	N	E	D	L	L	D	Q	L	V	K	Y	G	V	N	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															B	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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