Job Description P00452 Confidence 100.00% Date Thu Jan 5 10:56:38 GMT 2012 Rank 1 Aligned Residues 733 % Identity 100% Template c3r1rB_ PDB info PDB header:complex (oxidoreductase/peptide) Chain: B: PDB Molecule:ribonucleotide reductase r1 protein; PDBTitle: ribonucleotide reductase r1 protein with amppnp occupying2 the activity site from escherichia coli Resolution 3.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	T	K	R	D	G	S	T	E	R	I	N	L	D	K	I	H	R	V	L	D	W	A	A	E	G	L	H	N	V	S	I	S	Q	V	E	L	R	S	H	I	Q	F	Y	D	G	I	K	T	S	D	I	H	E	T	I	I	K	A	A	A	D	L	I	S	R	D	A	P	D	Y	Q	Y	L	A	A	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	T	K	R	D	G	S	T	E	R	I	N	L	D	K	I	H	R	V	L	D	W	A	A	E	G	L	H	N	V	S	I	S	Q	V	E	L	R	S	H	I	Q	F	Y	D	G	I	K	T	S	D	I	H	E	T	I	I	K	A	A	A	D	L	I	S	R	D	A	P	D	Y	Q	Y	L	A	A	R	L
Template Known Secondary structure							S	S	S																			T	T		S	S												T	T			T	T																T	T			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	F	H	L	R	K	K	A	Y	G	Q	F	E	P	P	A	L	Y	D	H	V	V	K	M	V	E	M	G	K	Y	D	N	H	L	L	E	D	Y	T	E	E	E	F	K	Q	M	D	T	F	I	D	H	D	R	D	M	T	F	S	Y	A	A	V	K	Q	L	E	G	K	Y	L	V	Q	N	R	V	T	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	F	H	L	R	K	K	A	Y	G	Q	F	E	P	P	A	L	Y	D	H	V	V	K	M	V	E	M	G	K	Y	D	N	H	L	L	E	D	Y	T	E	E	E	F	K	Q	M	D	T	F	I	D	H	D	R	D	M	T	F	S	Y	A	A	V	K	Q	L	E	G	K	Y	L	V	Q	N	R	V	T	G	E
Template Known Secondary structure												S	S	S	S														T	T	S	S		T						S														G	G	G	G	G	G													T	S		B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	E	S	A	Q	F	L	Y	I	L	V	A	A	C	L	F	S	N	Y	P	R	E	T	R	L	Q	Y	V	K	R	F	Y	D	A	V	S	T	F	K	I	S	L	P	T	P	I	M	S	G	V	R	T	P	T	R	Q	F	S	S	C	V	L	I	E	C	G	D	S	L	D	S	I	N	A	T	S	S	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	E	S	A	Q	F	L	Y	I	L	V	A	A	C	L	F	S	N	Y	P	R	E	T	R	L	Q	Y	V	K	R	F	Y	D	A	V	S	T	F	K	I	S	L	P	T	P	I	M	S	G	V	R	T	P	T	R	Q	F	S	S	C	V	L	I	E	C	G	D	S	L	D	S	I	N	A	T	S	S	A	I
Template Known Secondary structure		B																T	T	T	S		T	T	T														T	T	S											T	T	S	S														S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	Y	V	S	Q	R	A	G	I	G	I	N	A	G	R	I	R	A	L	G	S	P	I	R	G	G	E	A	F	H	T	G	C	I	P	F	Y	K	H	F	Q	T	A	V	K	S	C	S	Q	G	G	V	R	G	G	A	A	T	L	F	Y	P	M	W	H	L	E	V	E	S	L	L	V	L	K	N	N	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	Y	V	S	Q	R	A	G	I	G	I	N	A	G	R	I	R	A	L	G	S	P	I	R	G	G	E	A	F	H	T	G	C	I	P	F	Y	K	H	F	Q	T	A	V	K	S	C	S	Q	G	G	V	R	G	G	A	A	T	L	F	Y	P	M	W	H	L	E	V	E	S	L	L	V	L	K	N	N	R	G
Template Known Secondary structure						T	T	T								T	T	S			T	T				T	T	T	T						S													T	T	S	B	T	T	T	B	S									T	T	B	T	T					T	T	T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	G	N	R	V	R	H	M	D	Y	G	V	Q	I	N	K	L	M	Y	T	R	L	L	K	G	E	D	I	T	L	F	S	P	S	D	V	P	G	L	Y	D	A	F	F	A	D	Q	E	E	F	E	R	L	Y	T	K	Y	E	K	D	D	S	I	R	K	Q	R	V	K	A	V	E	L	F	S	L	M	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	G	N	R	V	R	H	M	D	Y	G	V	Q	I	N	K	L	M	Y	T	R	L	L	K	G	E	D	I	T	L	F	S	P	S	D	V	P	G	L	Y	D	A	F	F	A	D	Q	E	E	F	E	R	L	Y	T	K	Y	E	K	D	D	S	I	R	K	Q	R	V	K	A	V	E	L	F	S	L	M	M	Q
Template Known Secondary structure			G	G	G			T	T	S																T	T						B		G	G	G	S	T	T																							T	T	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	A	S	T	G	R	I	Y	I	Q	N	V	D	H	C	N	T	H	S	P	F	D	P	A	I	A	P	V	R	Q	S	N	L	C	L	E	I	A	L	P	T	K	P	L	N	D	V	N	D	E	N	G	E	I	A	L	C	T	L	S	A	F	N	L	G	A	I	N	N	L	D	E	L	E	E	L	A	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	A	S	T	G	R	I	Y	I	Q	N	V	D	H	C	N	T	H	S	P	F	D	P	A	I	A	P	V	R	Q	S	N	L	C	L	E	I	A	L	P	T	K	P	L	N	D	V	N	D	E	N	G	E	I	A	L	C	T	L	S	A	F	N	L	G	A	I	N	N	L	D	E	L	E	E	L	A	I	L
Template Known Secondary structure							S													T	S	S	B		T	T	T	S							T	T	S							B			S	S	T	T		T	T		B											T	T	S		S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	R	A	L	D	A	L	L	D	Y	Q	D	Y	P	I	P	A	A	K	R	G	A	M	G	R	R	T	L	G	I	G	V	I	N	F	A	Y	Y	L	A	K	H	G	K	R	Y	S	D	G	S	A	N	N	L	T	H	K	T	F	E	A	I	Q	Y	Y	L	L	K	A	S	N	E	L	A	K	E	Q	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	R	A	L	D	A	L	L	D	Y	Q	D	Y	P	I	P	A	A	K	R	G	A	M	G	R	R	T	L	G	I	G	V	I	N	F	A	Y	Y	L	A	K	H	G	K	R	Y	S	D	G	S	A	N	N	L	T	H	K	T	F	E	A	I	Q	Y	Y	L	L	K	A	S	N	E	L	A	K	E	Q	G	A
Template Known Secondary structure													S			S	S																											T	T			S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	W	F	N	E	T	T	Y	A	K	G	I	L	P	I	D	T	Y	K	K	D	L	D	T	I	A	N	E	P	L	H	Y	D	W	E	A	L	R	E	S	I	K	T	H	G	L	R	N	S	T	L	S	A	L	M	P	S	E	T	S	S	Q	I	S	N	A	T	N	G	I	E	P	P	R	G	Y	V	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	P	W	F	N	E	T	T	Y	A	K	G	I	L	P	I	D	T	Y	K	K	D	L	D	T	I	A	N	E	P	L	H	Y	D	W	E	A	L	R	E	S	I	K	T	H	G	L	R	N	S	T	L	S	A	L	M	P	S	E	T	S	S	Q	I	S	N	A	T	N	G	I	E	P	P	R	G	Y	V	S	I
Template Known Secondary structure			G	G	G	G	G	B	T	T	T	T	T							S		G	G	G	G	G	G							S															S	S	S			B		B				S						T	T				T	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	S	K	D	G	I	L	R	Q	V	V	P	D	Y	E	H	L	H	D	A	Y	E	L	L	W	E	M	P	G	N	D	G	Y	L	Q	L	V	G	I	M	Q	K	F	I	D	Q	S	I	S	A	N	T	N	Y	D	P	S	R	F	P	S	G	K	V	P	M	Q	Q	L	L	K	D	L	L	T	A	Y	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	S	K	D	G	I	L	R	Q	V	V	P	D	Y	E	H	L	H	D	A	Y	E	L	L	W	E	M	P	G	N	D	G	Y	L	Q	L	V	G	I	M	Q	K	F	I	D	Q	S	I	S	A	N	T	N	Y	D	P	S	R	F	P	S	G	K	V	P	M	Q	Q	L	L	K	D	L	L	T	A	Y	K	F
Template Known Secondary structure					T	T								T	T					T	T	T				G	G	G	S	S	S	S															S	S		B								G	G	G	S	G	G	G																	T
Template Predicted Secondary structure
Template SS confidence
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
		725	.	.	.	.	730	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	K	T	L	Y	Y	Q	N	T	R	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	K	T	L	Y	Y	Q	N	T	R	D	G
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.