Job Description P10902 Confidence 99.38% Date Thu Jan 5 11:32:21 GMT 2012 Rank 143 Aligned Residues 184 % Identity 21% Template c3q9tB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:choline dehydrogenase and related flavoproteins; PDBTitle: crystal structure analysis of formate oxidase Resolution 2.24 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.		.	.	.	.	.	.	.	.	40
Predicted Secondary structure																									.			.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.			.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	S	C	D	V	L	I	I	G	S	G	A	A	G	L	S	L	A	L	R	L	A	D	.	Q	H	.	Q	V	I	V	L	S	K	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.			.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.			.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	F	D	F	V	I	V	G	G	G	T	A	G	N	T	V	A	G	R	L	A	E	N	P	N	V	T	V	L	I	V	E	A	G	I	G	N	P	E	D	I	P	E	I	T	T	P	S	S	A	M	D	L	R	N	S	K	Y	D	W	A	Y	K	T	T	M	V	R	R	D	D	Y	E	R	I	E	K	P	N
Template Known Secondary structure										S		S											T	T	S	T	T	S							S	S		S		G	G	G						S	G	G	G	G	G	G	G	T	T	S	T	T	B											T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
						41	.	.	.	.	.	.	.	.	50	.	.	.	.												.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																						.	80	.	.	.	.
Predicted Secondary structure		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	V	T	E	G	S	T	F	Y	A	Q	G	G	I	A	.	.	.	.	.	.	.	.	.	.	.	A	V	F	D	E	T	D	S	I	D	S	H	V	E	D	T	L	I	A	G	A	G	I	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	H	A	V	E
Query Conservation		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	G	K	T	L	G	G	S	S	S	L	N	Y	F	T	W	V	P	G	H	K	A	T	F	D	Q	W	E	E	F	G	G	K	E	W	T	W	D	P	L	V	P	Y	L	R	K	S	A	T	Y	H	D	D	P	R	L	Y	S	P	E	L	E	K	I	G	G	G	G	P	I	P	I	S	H	A	E	L	I	D
Template Known Secondary structure				B		S	T	T	G	G	G	G	T	S														T	T						G	G	G	S										T	T						T	T			S		G	G	G	G	G	G			S		S										G
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	A	S	N	A	R	S	C	V	Q	W	L	I	D	Q	G	V	L	F	D	T	H	I	Q	P	N	G	E	E	S	Y	H	L	T	R	E	G	G	H	S	H	R	R	I	L	H	A	A	D	A	T	G	R	E	V	E	T	T	L	V	S	K	A	L	N	H	P	N	I	R	V	L	E	R	S	N	A	V	D
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	A	P	F	R	E	N	L	T	K	A	W	K	S	M	G	Q	P	L	I	E	N	I	Y	D	G	E	M	D	G	L	T	H	C	C	D	T	I	Y	R	G	Q	R	S	G	S	F	L	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	K	P	N	I	T	I	V	P	E	V	H	S	K	R
Template Known Secondary structure		G	G													T	T	T			B		S			S	S	S											S			T	T					G	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		T	T						S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.														.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	V	S	D	K	I	G	L	P	G	T	R	R	V	V	G	A	W	V	W	N	R	N	K	E	T	V	E	T	C	H	A	K	A	V	V	L	A	T	G	G	A	S
Query Conservation
Alig confidence								.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		L	I	I	N	E	A	.	.	.	.	.	D	R	T	C	K	G	V	T	V	V	T	A	A	G	N	E	L	N	F	F	A	D	R	E	V	I	L	S	Q	G	V	F	E
Template Known Secondary structure						T	T	.	.	.	.	.	T	T										T	T	S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.						.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions