 |
Job Description | P10902 | Confidence | 98.55% | Date | Thu Jan 5 11:32:21 GMT 2012 |
Rank | 247 | Aligned Residues | 42 |
% Identity | 29% | Template | c3i6dA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:protoporphyrinogen oxidase; |
PDBTitle: crystal structure of ppo from bacillus subtilis with af
|
Resolution | 2.90 Å |
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
|
|
. | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
. | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
| . |
|  |  |  |  |  |
|
|
|
|
|
|
| . | . |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
Query Sequence |   |
D | V | L | I | I | G | S | G | A | A | G | L | S | L | A | L | R | L | A | D | Q | . |
. |
. |
. |
. |
. |
H | . |
Q | V | I | V | L | S | K | G | P | V | T | E | G | . |
. |
S | T | F | Y | A | Q | G |
Query Conservation |   |
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|
|   | . | . | . | . | . | . |
| . |   |
|   |
|
|
|
|   |   |   |   |
|
| . | . |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |
|
Template Sequence |   |
H | V | V | I | I | G | G | G | I | T | G | L | A | A | A | F | Y | M | E | K | E | I | K | E | K | N | L | P | L | E | L | T | L | V | E | A | S | P | R | V | G | G | K | I | Q | T | V | K | K | D | G |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
| S |  |  |  |  |  |  |
| S | S | S | S | S |
| T | T |
|
|  |  |
|
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|