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Job DescriptionP10902
Confidence99.83%DateThu Jan 5 11:32:21 GMT 2012
Rank38Aligned Residues272
% Identity24%Templatec3dgzA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thioredoxin reductase 2; PDBTitle: crystal structure of mouse mitochondrial thioredoxin reductase, c-2 terminal 3-residue truncation
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30. ........40.........50.........60.........70.........80....
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Query Sequence  EHSCDVLIIGSGAAGLSLALRLADQH. QVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE
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Template Sequence  QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVG. . . . . . . . . . . . . . . . . . . CIPKKLM
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   4.....10.........20.........30.........40.........50....... ..60....
 
   85....90.........100.........110.........
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Query Sequence  FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  HQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKAT
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   120.........130........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . REGGHSHRRILHAADATGR
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Template Sequence  LLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFD
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BT
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   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   139140.........150.........160.........170.........180.........190.........200.........210........
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Query Sequence  EVETTLVSKALNHPNIRVLERSNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPD
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Template Sequence  QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT. . . . . . . NQLQVTWEDHASGKEDTGTFDTVLWAIG. . . . . . . . . . . . .
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   225....230.........240.........250...... ...260.........270.........280....
 
   219220.........230.........240.........250.........260.........270.........280.........290........
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Query Sequence  ISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAID
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   299300.........310.........320.........330.........340.........350.... .....360.........370.....
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Query Sequence  HEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHYTC. . . GGVMVDDHGRTDVEGLYAIGE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGD
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GGGTGGGGT

B
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   285....290.........300.........310.........320......
 
   376...380.........390.........400.........410.........420.........430.........440..
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Query Sequence  VSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMPYAHDISTLPPWDESRVENPDERVVIQHNWHE
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Template Sequence  VAEGRPEL. . . . . . . . TPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVAL
Template Known Secondary structure  GBTT



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   327..330.... .....340.........350.........360.........370.........380.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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