Job Description P10902 Confidence 99.22% Date Thu Jan 5 11:32:21 GMT 2012 Rank 169 Aligned Residues 274 % Identity 18% Template c3d1cA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:flavin-containing putative monooxygenase; PDBTitle: crystal structure of flavin-containing putative monooxygenase2 (np_373108.1) from staphylococcus aureus mu50 at 2.40 a resolution Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		H	S	C	D	V	L	I	I	G	S	G	A	A	G	L	S	L	A	L	R	L	A	D	Q	H	.	Q	V	I	V	L	S	K	G	P	V	T	E	G	S	T	F	Y	A	Q	G	G	I	A	A	V	F	D	E	T	D	S	I	D	S	H	V	E	D	T	L	I	A	G	A	G	I	C	D	R	H	A	V	E	F
Query Conservation																											.
Alig confidence																											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	H	H	K	V	A	I	I	G	A	G	A	A	G	I	G	X	A	I	T	L	K	D	F	G	I	T	D	V	I	I	L	E	K	G	T	V	G	H	S	F	K	H	W	P	K	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S													T	T									S	S	S	T	T					T	S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	S	N	A	R	S	C	V	Q	W	L	I	D	Q	G	V	L	F	D	T	H	I	Q	P	N	G	E	E	S	Y	H	L	T	R	E	G	G	H	S	H	R	R	I	L	H	A	A	D	A	T	G	R	E	V	E	T	T	L	V	S	K	A	L	N	H	P	N	I	R	V	L	E	R	S	N	A	V	D	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	I	T	P	S	F	T	S	N	G	F	G	X	P	D	X	N	A	I	S	X	D	T	S	P	A	F	T	F	N	E	E	H	I	S	G	E	T	Y	A	E	Y	L	Q	V	V	A	N	H	Y	E	L	N	I	F	E	N	T	V	V	T	N	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		S	S						G	G	G	T				T	T		S	S	T	T										S	S		B															T	T						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																							.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	S	D	K	I	G	L	P	G	T	R	R	V	V	G	A	W	V	W	N	R	N	K	E	T	V	E	T	C	H	A	K	A	V	V	L	A	T	G	G	A	S	K	V	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	T	N	P	D	I	S	S	G	D
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	D	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	T	I	A	T	T	T	E	T	Y	H	A	D	Y	I	F	V	A	T	G	D	Y	N	F	P	K	K	P	F	K	Y	G	I	H	Y	S	E	I	E	D	F	D	N	F	N	K	G	Q	Y	V	V	I	G	G	N	E	S	G	F	D
Template Known Secondary structure					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S	S														S	T	T	S	B				S	S	S				G	G	G		S		G	G	G	S		S	S								S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.															.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		G	I	A	M	A	W	R	A	G	C	R	V	A	N	L	E	.	.	.	.	F	N	Q	F	H	P	T	A	L	Y	H	P	Q	A	R	N	F	L	L	T	E	A	L	R	G	E	G	A	Y	L	K	R	P	D	G	T	R	F	M	P	D	F	D	E	R	G	E	L	A	P	R	D	I	V	A	R	A	I	D	H
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																																																						.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		A	A	Y	Q	L	A	K	N	G	S	D	I	A	L	Y	T	S	P	S	V	R	L	S	P	Y	T	R	Q	R	L	G	N	V	I	K	Q	G	A	R	I	E	X	N	V	H	Y	T	V	K	D	I	D	F	N	N	G	Q	Y	H	I	S	F	D	S	G	Q	S	V	H	T	P	H	E	.	.	.	.	.	.	.
Template Known Secondary structure									T	T										T	T	S															T	T								S										T	T							S	S	S						S	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	K	R	L	G	A	D	C	M	F	L	D	I	S	H	K	P	A	D	F	I	R	Q	H	F	P	M	I	Y	E	K	L	L	G	L	G	I	D	L	T	Q	E	P	V	P	I	V	P	A	A	H	Y	T	C	G	G	V	M	V	D	D	H	G	R	T	D	V	E	G	L	Y	A	I	G	E	V	S	Y	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	L	A	T	G	F	D	A	T	K	N	P	I	V	Q	Q	L	F	V	T	T	N	Q	D	I	K	L	T	T	H	D	E	S	T	R	Y	P	N	I	F	X	I	G	A	T	V	E	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							B		G	G	G	S							S			T	T	S				B		T	T	S	B	B	S	S	S	T	T					S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																	263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		380
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		312

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions