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Job DescriptionP10902
Confidence99.53%DateThu Jan 5 11:32:21 GMT 2012
Rank107Aligned Residues338
% Identity13%Templatec3cgdB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:pyridine nucleotide-disulfide oxidoreductase, class i; PDBTitle: pyridine nucleotide complexes with bacillus anthracis coenzyme a-2 disulfide reductase: a structural analysis of dual nad(p)h3 specificity
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30. ........40.........50.........60.........70.........80.....
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Query Sequence  CDVLIIGSGAAGLSLALRLADQH. . . QVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEF
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Template Sequence  MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTE. . . . . . . . . . . . . . . . . . . . . . . .
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S
TT

SSS

SB
GGGTTSSS
GG........................
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   1........10.........20.........30.........40.........50......
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  VASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KLIARNVKTFRDKYGIDAKVRHEVTKV
Template Known Secondary structure  .....................................................GGBSS
TT

SS
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   57..60.........70.........80...
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  IVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHP
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Template Sequence  DTEKK. . . . . . . . . . IVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDV
Template Known Secondary structure  TTTT..........TTT


S







BTTTSBT

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   84.... .90.........100.........110.........120.........130.........140.........150...
 
   246...250.........260.........270.........280.........290.........300.........310.... ...
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Query Sequence  TALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDIS. . . . . . . . HKP
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Template Sequence  TIIGGGAIGLEMAETFVEL. . . . . . . . . GKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVE
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ST.........T

SSSSSSTTS
TT

S


SSB

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   154.....160.........170.. .......180.........190.........200.........210.........220....
 
   318.320.........330.........340.........350.........360.........370.........380.........390.... ..
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Query Sequence  ADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLE. CL
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Template Sequence  AVETDKGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTAN
Template Known Secondary structure  SS

S


S
GGGTTS


B
TTS
B


TTSB
SSTT
GGGB
BTTT
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   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   397..400.........410.........420.........430.........440..
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Query Sequence  VYGWSAAEDITRRMPYAHDISTLPPWDESRVENPDERVVIQHNWHE
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Template Sequence  KQGRLAGLNMLDKRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGL
Template Known Secondary structure  TT






B


TT

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   305....310.........320.........330.........340.........350
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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